RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	ABCG1	P45844	678 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	KLHL38	Q2WGJ6	581 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	RALGPS1	Q5JS13	557 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	AP1AR	Q63HQ0	302 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	RIPOR1	Q6ZS17	1223 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	KRT27	Q7Z3Y8	459 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	NUDCD3	Q8IVD9	361 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	RNF149	Q8NC42	400 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	ZNF302	Q9NR11	478 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	SMYD2	Q9NRG4	433 aa		13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.58	□□□□□ -0.23
CHRNA7-223	ENST00000637033	SKI	P12755	728 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	RBL1	P28749	1068 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	PHKA2	P46019	1235 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	INHBE	P58166	350 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	MRPS35	P82673	323 aa	Known RBP	13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SLC25A11	Q02978	314 aa	Known RBP	13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	CAPS	Q13938	189 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	PIGH	Q14442	188 aa	Predicted RBP	13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	RASIP1	Q5U651	963 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	LPCAT4	Q643R3	524 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	CES3	Q6UWW8	571 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	TRIM72	Q6ZMU5	477 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	NDUFAF2	Q8N183	169 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ENDOV	Q8N8Q3	282 aa	Known RBP	13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	NKD2	Q969F2	451 aa	Predicted RBP	13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	PEBP4	Q96S96	227 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	CGRRF1	Q99675	332 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	IQANK1	A0A1B0GTG1	560 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033		I3L4J1	428 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	INO80B-WBP1	J3KQ70	363 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	CCNG1	P51959	295 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	PGGT1B	P53609	377 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	IGBP1	P78318	339 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	PRKD1	Q15139	912 aa	Predicted RBP	13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SMC1B	Q8NDV3	1235 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	INO80B	Q9C086	356 aa	Predicted RBP	13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	USP18	Q9UMW8	372 aa		13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033	DRG1	Q9Y295	367 aa	Known RBP	13.58	□□□□□ -0.24
CHRNA7-223	ENST00000637033		M0QYV0	167 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	C6orf222	P0C671	652 aa	Predicted RBP	13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	GTF2A2	P52657	109 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ATXN1	P54253	815 aa	Known RBP	13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	TGFB2	P61812	414 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SNRPF	P62306	86 aa	Known RBP	13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	RPL10A	P62906	217 aa	Known RBP	13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	HADH	Q16836	314 aa	Known RBP	13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	OR6B2	Q6IFH4	312 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	DENND5B	Q6ZUT9	1274 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	C12orf29	Q8N999	325 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	PPP1R13L	Q8WUF5	828 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SKA1	Q96BD8	255 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	PANX3	Q96QZ0	392 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	LPIN3	Q9BQK8	851 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	WDR46	O15213	610 aa	Known RBP	13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	TBXAS1	P24557	533 aa	Predicted RBP	13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ROR1	Q01973	937 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SLC26A7	Q8TE54	656 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	APOPT1	Q96IL0	206 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	TUBGCP5	Q96RT8	1024 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	VPS11	Q9H270	941 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ARHGEF4	Q9NR80	690 aa		13.57	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	RNF8	O76064	485 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ASS1	P00966	412 aa	Known RBP	13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	HMGCR	P04035	888 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	CSH1	P0DML2	217 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	CSH2	P0DML3	217 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	CXCL8	P10145	99 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	CD1E	P15812	388 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ACADS	P16219	412 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ABHD15	Q6UXT9	468 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	RGS9BP	Q6ZS82	235 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	E2F7	Q96AV8	911 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	HEXIM2	Q96MH2	286 aa	Known RBP	13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	MAN1C1	Q9NR34	630 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	COX16	Q9P0S2	106 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SLX4	Q8IY92	1834 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	DOCK5	Q9H7D0	1870 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	MYO18A	Q92614	2054 aa	Known RBP	13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	CCDC78	A2IDD5	438 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SIGLEC16	A6NMB1	481 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ITM2A	O43736	263 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ETV4	P43268	484 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	KRT81	Q14533	505 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	XKR3	Q5GH77	459 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	NSUN6	Q8TEA1	469 aa	Known RBP	13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	FAM136A	Q96C01	138 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	VCPIP1	Q96JH7	1222 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	ADPGK	Q9BRR6	497 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	TRIM4	Q9C037	500 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	NIF3L1	Q9GZT8	377 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	MIS12	Q9H081	205 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	VCX	Q9H320	206 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	PDLIM7	Q9NR12	457 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SAR1A	Q9NR31	198 aa		13.56	□□□□□ -0.24
CHRNA7-223	ENST00000637033	SLC7A8	Q9UHI5	535 aa		13.56	□□□□□ -0.24

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