RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 SNRPAP09012 282 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 CCDC166P0CW27 439 aa16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 GARTP22102 1010 aa16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 CRKP46108 304 aa16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 AQP4P55087 323 aa16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 WASHC5Q12768 1159 aa16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 MSLNQ13421 630 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 CUL2Q13617 745 aa16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 PLA2G4FQ68DD2 849 aa16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 MCEEQ96PE7 176 aa16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 FAM213AQ9BRX8 229 aa16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 HBS1LQ9Y450 684 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-235ENST00000637004 TCRBV7S3A2A0A539 114 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 PEX1O43933 1283 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 RPL5P46777 297 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 BASP1P80723 227 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 PDE1BQ01064 536 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 ZNF252P-AS1Q0IIN9 211 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 MTM1Q13496 603 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 ZACNQ401N2 412 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 WDR78Q5VTH9 848 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 LPCAT4Q643R3 524 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 KLC3Q6P597 504 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 SLC39A4Q6P5W5 647 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 B3GNT6Q6ZMB0 384 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 CDHR3Q6ZTQ4 885 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 POLNQ7Z5Q5 900 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 NCAPG2Q86XI2 1143 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 C4orf19Q8IY42 314 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 ICA1LQ8NDH6 482 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 SPIRE2Q8WWL2 714 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 ACSF2Q96CM8 615 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 ZDHHC15Q96MV8 337 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 MECRQ9BV79 373 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 KIFC3Q9BVG8 833 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 ZC3H12CQ9C0D7 883 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 KBTBD13C9JR72 458 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 HNRNPDLO14979 420 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 ZSCAN9O15535 394 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 GH2P01242 217 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 WEE2P0C1S8 567 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 KITP10721 976 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 SSTR3P32745 418 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 CACNB3P54284 484 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 DYNLT1P63172 113 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 DLG1Q12959 904 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 HSP90AA5PQ58FG0 334 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 XKR9Q5GH70 373 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 TXNRD3NBQ6F5E7 133 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 ZNF516Q92618 1163 aa16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 SUDS3Q9H7L9 328 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 MARCOQ9UEW3 520 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-235ENST00000637004 TXNDC9O14530 226 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 DHX15O43143 795 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 CST8O60676 142 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 KLHL2O95198 593 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 DESP17661 470 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 TNNI1P19237 187 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 INHBCP55103 352 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 TTLL12Q14166 644 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 TEX44Q53QW1 395 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 ANGEL2Q5VTE6 544 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 UGT2A3Q6UWM9 527 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 BBS12Q6ZW61 710 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 NIPA1Q7RTP0 329 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 TAB3Q8N5C8 712 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 IDI2Q9BXS1 227 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 SMYD3Q9H7B4 428 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 MKS1Q9NXB0 559 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 SAE1Q9UBE0 346 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 ZNF180Q9UJW8 692 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 ADAMTS6Q9UKP5 1117 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 SDR42E2A6NKP2 422 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 HNRNPRO43390 633 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 STRNO43815 780 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 C6orf222P0C671 652 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 TBXAS1P24557 533 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 PEX2P28328 305 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 CLDN10P78369 228 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 TRIP10Q15642 601 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 IGDCC3Q8IVU1 814 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 CTAGE3PQ8IX95 158 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 NIPA2Q8N8Q9 360 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 IRGQQ8WZA9 623 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 PNPLA8Q9NP80 782 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 MAD1L1Q9Y6D9 718 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 TEX264Q9Y6I9 313 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 C15orf38-AP3S2A0A0A6YYH1 394 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 TMEM150BA6NC51 233 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 SNNO75324 88 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 MAGEA8P43361 318 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 SLC25A3Q00325 362 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 DEUP1Q05D60 604 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 UBAP2LQ14157 1087 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 ARPINQ7Z6K5 226 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 WDR75Q8IWA0 830 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 PRICKLE1Q96MT3 831 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 CATSPER2Q96P56 530 aa16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 NTPCRQ9BSD7 190 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-235ENST00000637004 Q9H521 79 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms