RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CBX2Q14781 532 aaPredicted RBP16.85■□□□□ 0.29
CLN6-216ENST00000636876 SLC5A9Q2M3M2 681 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 PRSS36Q5K4E3 855 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 NAA35Q5VZE5 725 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 WDR59Q6PJI9 974 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 GAREM2Q75VX8 874 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 SPC24Q8NBT2 197 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 FBXO32Q969P5 355 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 TCEAL4Q96EI5 215 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 NOX5Q96PH1 765 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 POMKQ9H5K3 350 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 ST7Q9NRC1 585 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 SEPT11Q9NVA2 429 aaKnown RBP16.85■□□□□ 0.29
CLN6-216ENST00000636876 IMPACTQ9P2X3 320 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 SCML2Q9UQR0 700 aa16.85■□□□□ 0.29
CLN6-216ENST00000636876 NRG2O14511 850 aaPredicted RBP16.84■□□□□ 0.29
CLN6-216ENST00000636876 MOSPD3O75425 235 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 TADA3O75528 432 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 FSHRP23945 695 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 CLEC16AQ2KHT3 1053 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 PUS10Q3MIT2 529 aaKnown RBP16.84■□□□□ 0.29
CLN6-216ENST00000636876 PTCRAQ6ISU1 281 aaPredicted RBP16.84■□□□□ 0.29
CLN6-216ENST00000636876 CCDC186Q7Z3E2 898 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 TMEM150AQ86TG1 271 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 TMEM110Q86TL2 294 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 SIX6OS1Q8N1H7 587 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 ITFG1Q8TB96 612 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 SHKBP1Q8TBC3 707 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 OVCA2Q8WZ82 227 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 PPP1R13BQ96KQ4 1090 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 SLITRK1Q96PX8 696 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 GCNAQ96QF7 691 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 CPXM1Q96SM3 734 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 ULBP1Q9BZM6 244 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 ARHGAP20Q9P2F6 1191 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 MRPS23Q9Y3D9 190 aaKnown RBP16.84■□□□□ 0.29
CLN6-216ENST00000636876 DENND4AQ7Z401 1863 aa16.84■□□□□ 0.29
CLN6-216ENST00000636876 A0A1W2PRU2 124 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 E5RJQ4 531 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 PIK3R2O00459 728 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 DDX3XO00571 662 aaKnown RBP eCLIP16.83■□□□□ 0.282e-13■■■□□ 16.8
CLN6-216ENST00000636876 NCANO14594 1321 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 FBXO21O94952 628 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 ZBED1O96006 694 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 PLEKP08567 350 aaPredicted RBP16.83■□□□□ 0.28
CLN6-216ENST00000636876 USP17L7P0C7H9 530 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 UNGP13051 313 aaPredicted RBP16.83■□□□□ 0.28
CLN6-216ENST00000636876 LCP1P13796 627 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 CEBPBP17676 345 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 AAK1Q2M2I8 961 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 PTPN20Q4JDL3 420 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 PM20D1Q6GTS8 502 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 SCML4Q8N228 414 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 PDZD8Q8NEN9 1154 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 CPA5Q8WXQ8 436 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 PANX2Q96RD6 677 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 ATXN3LQ9H3M9 355 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 CNGB3Q9NQW8 809 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 TRPM5Q9NZQ8 1165 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 GMIPQ9P107 970 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 FAM50BQ9Y247 325 aa16.83■□□□□ 0.28
CLN6-216ENST00000636876 MYO16Q9Y6X6 1858 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 GOLGA6L6A8MZA4 724 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 ZDHHC11BP0C7U3 371 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 GJA1P17302 382 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 EIF4A3P38919 411 aaKnown RBP16.82■□□□□ 0.28
CLN6-216ENST00000636876 PPP3CCP48454 512 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 SNX16P57768 344 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 CYP4F8P98187 520 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 CDK17Q00537 523 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 CENPCQ03188 943 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 SMAD2Q15796 467 aaKnown RBP16.82■□□□□ 0.28
CLN6-216ENST00000636876 GET4Q7L5D6 327 aaPredicted RBP16.82■□□□□ 0.28
CLN6-216ENST00000636876 BHLHA9Q7RTU4 235 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 VPS36Q86VN1 386 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 ERICH1Q86X53 443 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 MSANTD4Q8NCY6 345 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 SLC30A5Q8TAD4 765 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 IPO4Q8TEX9 1081 aaKnown RBP16.82■□□□□ 0.28
CLN6-216ENST00000636876 ING5Q8WYH8 240 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 MRPS31Q92665 395 aaKnown RBP16.82■□□□□ 0.28
CLN6-216ENST00000636876 TJP2Q9UDY2 1190 aa16.82■□□□□ 0.28
CLN6-216ENST00000636876 CHORDC1Q9UHD1 332 aaPredicted RBP16.82■□□□□ 0.28
CLN6-216ENST00000636876 DENND4CQ5VZ89 1909 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 SSU72P8A0A1W2PR75 194 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 FAM170AA1A519 330 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 ZNF840PA6NDX5 716 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 PAPSS1O43252 624 aaPredicted RBP16.81■□□□□ 0.28
CLN6-216ENST00000636876 ERBB2P04626 1255 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 MMP8P22894 467 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 NSFP46459 744 aaKnown RBP16.81■□□□□ 0.28
CLN6-216ENST00000636876 GABRB2P47870 512 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 PGFP49763 221 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 DAOAP59103 153 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 MAPK8IP2Q13387 824 aaPredicted RBP16.81■□□□□ 0.28
CLN6-216ENST00000636876 TEAD2Q15562 447 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 ARHGAP15Q53QZ3 475 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 SCD5Q86SK9 330 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 MON1AQ86VX9 555 aa16.81■□□□□ 0.28
CLN6-216ENST00000636876 NPAS3Q8IXF0 933 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms