RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 NR1H3Q13133 447 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 PSMD2Q13200 908 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 KCNJ12Q14500 433 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 KRT31Q15323 416 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 MAPRE1Q15691 268 aaKnown RBP13.43□□□□□ -0.26
CTSD-208ENST00000636843 DUOXA2Q1HG44 320 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 SCARA3Q6AZY7 606 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 VSTM1Q6UX27 236 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 NYAP1Q6ZVC0 841 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 SCN4BQ8IWT1 228 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 C12orf50Q8NA57 414 aaPredicted RBP13.43□□□□□ -0.26
CTSD-208ENST00000636843 CD101Q93033 1021 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 FAM84AQ96KN4 292 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 C16orf45Q96MC5 204 aaPredicted RBP13.43□□□□□ -0.26
CTSD-208ENST00000636843 CYP2S1Q96SQ9 504 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 FGFBP2Q9BYJ0 223 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 ARRDC1-AS1Q9H2J1 176 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 KIAA1586Q9HCI6 787 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 FBRSL1Q9HCM7 1045 aaKnown RBP13.43□□□□□ -0.26
CTSD-208ENST00000636843 GCNT4Q9P109 453 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 MAGEC2Q9UBF1 373 aaPredicted RBP13.43□□□□□ -0.26
CTSD-208ENST00000636843 CDH9Q9ULB4 789 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 PCDHGA5Q9Y5G8 931 aa13.43□□□□□ -0.26
CTSD-208ENST00000636843 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.43□□□□□ -0.26
CTSD-208ENST00000636843 DENND4CQ5VZ89 1909 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 CACNA1BQ00975 2339 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 AKR1B15C9JRZ8 316 aaPredicted RBP13.42□□□□□ -0.26
CTSD-208ENST00000636843 TPM1P09493 284 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 PFKLP17858 780 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 TRIM14Q14142 442 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 AASDHQ4L235 1098 aaPredicted RBP13.42□□□□□ -0.26
CTSD-208ENST00000636843 E4F1Q66K89 784 aaPredicted RBP13.42□□□□□ -0.26
CTSD-208ENST00000636843 LMBRD2Q68DH5 695 aaPredicted RBP13.42□□□□□ -0.26
CTSD-208ENST00000636843 IL31Q6EBC2 164 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 TTI2Q6NXR4 508 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 SYT13Q7L8C5 426 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 KBTBD6Q86V97 674 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 FAM114A1Q8IWE2 563 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 TC2NQ8N9U0 490 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 CCDC26Q8TAB7 109 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 SH3RF2Q8TEC5 729 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 ACDQ96AP0 544 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 ZC3H10Q96K80 434 aaKnown RBP13.42□□□□□ -0.26
CTSD-208ENST00000636843 PANX2Q96RD6 677 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 SLC22A12Q96S37 553 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 SYT15Q9BQS2 421 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 MAPK8IP1Q9UQF2 711 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 RALGAPA1Q6GYQ0 2036 aa13.42□□□□□ -0.26
CTSD-208ENST00000636843 EPG5Q9HCE0 2579 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 ZNF638Q14966 1978 aaKnown RBP13.41□□□□□ -0.26
CTSD-208ENST00000636843 DYNC1I1O14576 645 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 TEX33O43247 280 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 HCRTO43612 131 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 ATP2C2O75185 946 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 HDCP19113 662 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 WARSP23381 471 aaKnown RBP13.41□□□□□ -0.26
CTSD-208ENST00000636843 CCDC142Q17RM4 750 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 EML3Q32P44 896 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 CEP135Q66GS9 1140 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 FOXR2Q6PJQ5 311 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 WDR49Q8IV35 697 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 ARL14EPQ8N8R7 260 aaPredicted RBP13.41□□□□□ -0.26
CTSD-208ENST00000636843 OR5B17Q8NGF7 314 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 RPLP0P6Q8NHW5 317 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 KBTBD7Q8WVZ9 684 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 BAG1Q99933 345 aaPredicted RBP13.41□□□□□ -0.26
CTSD-208ENST00000636843 NAA15Q9BXJ9 866 aaKnown RBP13.41□□□□□ -0.26
CTSD-208ENST00000636843 HSPBP1Q9NZL4 362 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 EHD2Q9NZN4 543 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 ARHGAP26Q9UNA1 814 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 WNT6Q9Y6F9 365 aa13.41□□□□□ -0.26
CTSD-208ENST00000636843 C2orf78A6NCI8 922 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 USP27XA6NNY8 438 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 EIF3DO15371 548 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTSD-208ENST00000636843 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 NFATC1O95644 943 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 APBB3O95704 486 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 FAM163BP0C2L3 166 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 BDNFP23560 247 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 LMO2P25791 158 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 STK4Q13043 487 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 SF3A2Q15428 464 aaKnown RBP13.4□□□□□ -0.26
CTSD-208ENST00000636843 PLA2G2CQ5R387 149 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 NAIF1Q69YI7 327 aaPredicted RBP13.4□□□□□ -0.26
CTSD-208ENST00000636843 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 TMEM139Q8IV31 216 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 CNGA4Q8IV77 575 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 KIAA1958Q8N8K9 716 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 TTC16Q8NEE8 873 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 MYLPFQ96A32 169 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 HHIPQ96QV1 700 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 TTLL2Q9BWV7 592 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 SRRTQ9BXP5 876 aaKnown RBP13.4□□□□□ -0.26
CTSD-208ENST00000636843 CRTAC1Q9NQ79 661 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 TRPM5Q9NZQ8 1165 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 EBF1Q9UH73 591 aa13.4□□□□□ -0.26
CTSD-208ENST00000636843 SPAG17Q6Q759 2223 aa13.4□□□□□ -0.27
CTSD-208ENST00000636843 PTPRJQ12913 1337 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms