RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 C2orf40Q9H1Z8 148 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 PTPRHQ9HD43 1115 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 TTLL3Q9Y4R7 772 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 H0Y3Z8 333 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 KIF3CO14782 793 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 GYG2O15488 501 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 EGFRP00533 1210 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 LINGO3P0C6S8 592 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 CHRM1P11229 460 aaPredicted RBP15.16■□□□□ 0.02
CLN6-215ENST00000636674 BGNP21810 368 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 RPS12P25398 132 aaKnown RBP15.16■□□□□ 0.02
CLN6-215ENST00000636674 MAGEA6P43360 314 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 STAT5BP51692 787 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 TFDP2Q14188 446 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 MXD4Q14582 209 aaPredicted RBP15.16■□□□□ 0.02
CLN6-215ENST00000636674 ANGEL2Q5VTE6 544 aaKnown RBP15.16■□□□□ 0.02
CLN6-215ENST00000636674 DPY19L2Q6NUT2 758 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 CCDC62Q6P9F0 684 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 MPZL3Q6UWV2 235 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 TSHZ1Q6ZSZ6 1077 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 CYP4V2Q6ZWL3 525 aaPredicted RBP15.16■□□□□ 0.02
CLN6-215ENST00000636674 CHST13Q8NET6 341 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 OXNAD1Q96HP4 312 aaPredicted RBP15.16■□□□□ 0.02
CLN6-215ENST00000636674 FAM167BQ9BTA0 163 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 NMRK2Q9NPI5 230 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 ASNSD1Q9NWL6 643 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 NMRK1Q9NWW6 199 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 KCNK4Q9NYG8 393 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 PAK5Q9P286 719 aa15.16■□□□□ 0.02
CLN6-215ENST00000636674 SCN4AP35499 1836 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 SPDYE16A6NNV3 312 aaPredicted RBP15.15■□□□□ 0.02
CLN6-215ENST00000636674 A8MXQ7 604 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 FZD9O00144 591 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 NVLO15381 856 aaKnown RBP15.15■□□□□ 0.02
CLN6-215ENST00000636674 SKAP2O75563 359 aaPredicted RBP15.15■□□□□ 0.02
CLN6-215ENST00000636674 ATP5BP06576 529 aaKnown RBP15.15■□□□□ 0.02
CLN6-215ENST00000636674 GSTA2P09210 222 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 RARBP10826 455 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 PYGBP11216 843 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 ACSBG2Q5FVE4 666 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 RAB3IL1Q8TBN0 382 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 TTC17Q96AE7 1141 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 FAM136AQ96C01 138 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 FBXO6Q9NRD1 293 aaPredicted RBP15.15■□□□□ 0.02
CLN6-215ENST00000636674 PICK1Q9NRD5 415 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 TAS2R1Q9NYW7 299 aa15.15■□□□□ 0.02
CLN6-215ENST00000636674 IGKV6-21A0A0C4DH24 114 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 IL18RAPO95256 599 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 EDNRBP24530 442 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 PRKCHP24723 683 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 RAP1GDS1P52306 607 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 ZNF143P52747 638 aaPredicted RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 YWHAZP63104 245 aaKnown RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 CNTN2Q02246 1040 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 ZBTB16Q05516 673 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 PTPN11Q06124 597 aaPredicted RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 LAMTOR4Q0VGL1 99 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 TAF5Q15542 800 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 MUM1Q2TAK8 710 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 ZNF667Q5HYK9 610 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 NBPF12Q5TAG4 269 aaPredicted RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 TRIM68Q6AZZ1 485 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 IRGCQ6NXR0 463 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 DARS2Q6PI48 645 aaKnown RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 DHX37Q8IY37 1157 aaKnown RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 EXOC8Q8IYI6 725 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 ARHGAP24Q8N264 748 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 HSPH1Q92598 858 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 MCUR1Q96AQ8 359 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 PEBP4Q96S96 227 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 SRPK1Q96SB4 655 aaKnown RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 CALN1Q9BXU9 219 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 SYNCQ9H7C4 482 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 ARHGEF4Q9NR80 690 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 PCSK1NQ9UHG2 260 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLN6-215ENST00000636674 LRCH1Q9Y2L9 728 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 FCHO1O14526 889 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 COPEO14579 308 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 TRDMT1O14717 391 aaKnown RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 MAGEC1O60732 1142 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 KRT37O76014 449 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 PSMG1O95456 288 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 SNRPAP09012 282 aaKnown RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 MYL2P10916 166 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 YWHAGP61981 247 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLN6-215ENST00000636674 KLC1Q07866 573 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 RCN1Q15293 331 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 RINLQ6ZS11 566 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 APBB1IPQ7Z5R6 666 aaPredicted RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 ARMC2Q8NEN0 867 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 USP6NLQ92738 828 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 LRRC39Q96DD0 335 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 PRR11Q96HE9 360 aaPredicted RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 CNPY3Q9BT09 278 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 SDCBP2Q9H190 292 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 VRTNQ9H8Y1 702 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 USP29Q9HBJ7 922 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 POPDC2Q9HBU9 364 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms