RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SMIM31A0A1B0GVY4 71 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 CHADO15335 359 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 CAP2P40123 477 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 SOX10P56693 466 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 NCOA4Q13772 614 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 PGM5Q15124 567 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 CHI3L2Q15782 390 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 HSF5Q4G112 596 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 KCNN1Q92952 543 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 CLPTM1LQ96KA5 538 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 STN1Q9H668 368 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 C10orf88Q9H8K7 445 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 ZWILCHQ9H900 591 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 RNASEH1O60930 286 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 KRT38O76015 456 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 PENKP01210 267 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 RBP3P10745 1247 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 EIF2AK2P19525 551 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 AP3M2P53677 418 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 WNT7BP56706 349 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 MAP7Q14244 749 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 TEX44Q53QW1 395 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 CDHR3Q6ZTQ4 885 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 ARCQ7LC44 396 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 CTAGE3PQ8IX95 158 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 MASTLQ96GX5 879 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 PCDHGC3Q9UN70 934 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 HBS1LQ9Y450 684 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 UBR3Q6ZT12 1888 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 SNNO75324 88 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 KLHL2O95198 593 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 PIGRP01833 764 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 MYCLP12524 364 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 UQCRBP14927 111 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 ALDH18A1P54886 795 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 GRM2Q14416 872 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 RFX6Q8HWS3 928 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 TAB3Q8N5C8 712 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 PPM1NQ8N819 430 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 ITFG2Q969R8 447 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 KLHL4Q9C0H6 718 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 POLR3FQ9H1D9 316 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 EBF3Q9H4W6 596 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 ATXN10Q9UBB4 475 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 GABBR1Q9UBS5 961 aa15.41■□□□□ 0.06
CACNA1A-220ENST00000635988 MYH9P35579 1960 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 A0A088AWK7 358 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 A0A1B0GVG6 124 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 PRR5-ARHGAP8B1AHC4 643 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 OPHN1O60890 802 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 LRCH4O75427 683 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 ARHGAP8P85298 464 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 MTM1Q13496 603 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 KCNJ11Q14654 390 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 MDH1BQ5I0G3 518 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 GPAT2Q6NUI2 795 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 PRMT6Q96LA8 375 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 TAAR1Q96RJ0 339 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 EPB41L1Q9H4G0 881 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 XPNPEP1Q9NQW7 623 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 THAP1Q9NVV9 213 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 TMCO1Q9UM00 188 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 SDR42E2A6NKP2 422 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 CCNT2O60583 730 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 KRT3P12035 628 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 CPOXP36551 454 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 ROR1Q01973 937 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 STX3Q13277 289 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 SMTNL2Q2TAL5 461 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 XRRA1Q6P2D8 792 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 WDR75Q8IWA0 830 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 KCTD6Q8NC69 237 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 MECRQ9BV79 373 aa15.4■□□□□ 0.06
CACNA1A-220ENST00000635988 ZNF541Q9H0D2 1346 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 ARHGAP42A6NI28 874 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 MAFGO15525 162 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 ZNF862O60290 1169 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 USP1O94782 785 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 PRKCHP24723 683 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 CRHR1P34998 444 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 RFC1P35251 1148 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 ITGA9Q13797 1035 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 FAM43BQ6ZT52 329 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 RAPH1Q70E73 1250 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 CMASQ8NFW8 434 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 SPATA18Q8TC71 538 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 NAT14Q8WUY8 206 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 PDCD2LQ9BRP1 358 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 FAM96AQ9H5X1 160 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 RSAD1Q9HA92 442 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 IRAK4Q9NWZ3 460 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 TTLL3Q9Y4R7 772 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 TESPA1A2RU30 521 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 RFPL1O75677 317 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 STBD1O95210 358 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms