RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 F11P03951 625 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 CYP1A1P04798 512 aaPredicted RBP8.98□□□□□ -0.97
CDKL5-209ENST00000635828 TPM3P06753 285 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 ABCB4P21439 1286 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 PAX3P23760 479 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 PLA2G4AP47712 749 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 NUMBP49757 651 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 BCAT1P54687 386 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 PTP4A2Q12974 167 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 RAB41Q5JT25 222 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 PRSS36Q5K4E3 855 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 RAD9BQ6WBX8 426 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 GPR65Q8IYL9 337 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 SPATA18Q8TC71 538 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 RSPRY1Q96DX4 576 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 RPGRIP1Q96KN7 1286 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 DESI2Q9BSY9 194 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 PDCL3Q9H2J4 239 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 ATXN3LQ9H3M9 355 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 TRPC7Q9HCX4 862 aa8.98□□□□□ -0.97
CDKL5-209ENST00000635828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.98□□□□□ -0.97
CDKL5-209ENST00000635828 CARNS1A5YM72 827 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 GOLGA8SH3BPF8 625 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 XPO1O14980 1071 aaKnown RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 PRAMEF12O95522 483 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 FAM163BP0C2L3 166 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 VIPR2P41587 438 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 TUFMP49411 452 aaKnown RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 EPHB3P54753 998 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 YWHAEP62258 255 aaKnown RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 CREMQ03060 361 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 MAPRE1Q15691 268 aaKnown RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 ASTE1Q2TB18 679 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 VSTM1Q6UX27 236 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 OR8K1Q8NGG5 319 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 FGF13Q92913 245 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 P2RY11Q96G91 374 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 BTBD6Q96KE9 485 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 PPP1R13BQ96KQ4 1090 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 ZNF512Q96ME7 567 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 CDCA3Q99618 268 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 SLC46A2Q9BY10 475 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 NHEJ1Q9H9Q4 299 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 ABCB6Q9NP58 842 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 TMPRSS4Q9NRS4 437 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 GKN1Q9NS71 199 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 SMPD4Q9NXE4 827 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 HESX1Q9UBX0 185 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 SFMBT1Q9UHJ3 866 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 PCDHGC3Q9UN70 934 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 NAALADL1Q9UQQ1 740 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 ASGR2P07307 311 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 RFX1P22670 979 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 MAGEA11P43364 429 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 IER5LQ5T953 404 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 CCDC149Q6ZUS6 474 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 ARL14EPQ8N8R7 260 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 FGF14Q92915 247 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 C8orf48Q96LL4 319 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 NUP58Q9BVL2 599 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 CD207Q9UJ71 328 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 RCCD1A6NED2 376 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 MSI1O43347 362 aaKnown RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 RPL7AP62424 266 aaKnown RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 PTCRAQ6ISU1 281 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-209ENST00000635828 JOSD2Q8TAC2 188 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 FBXO32Q969P5 355 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 PPP2R3CQ969Q6 453 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 ARHGEF26Q96DR7 871 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 USP3Q9Y6I4 520 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 DUSP10Q9Y6W6 482 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 BPTFQ12830 3046 aa8.97□□□□□ -0.97
CDKL5-209ENST00000635828 TRIM66O15016 1216 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 FERP16591 822 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 RRM1P23921 792 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 ANXA13P27216 316 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 MRE11P49959 708 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 CLEC16AQ2KHT3 1053 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 NPAS3Q8IXF0 933 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 ACRBPQ8NEB7 543 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 SUSD6Q92537 303 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 ZFYVE19Q96K21 471 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 PLA2G2FQ9BZM2 168 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 THAP2Q9H0W7 228 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 KCNF1Q9H3M0 494 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 ZDHHC7Q9NXF8 308 aa8.96□□□□□ -0.97
CDKL5-209ENST00000635828 REXO2Q9Y3B8 237 aaKnown RBP8.96□□□□□ -0.97
CDKL5-209ENST00000635828 SYNJ2BP-COX16A0A087WUM0 186 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 ZNF840PA6NDX5 716 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 C2CD4DB7Z1M9 353 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 PRKCIP41743 596 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 MEA1Q16626 185 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 PARM1Q6UWI2 310 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 PDZD4Q76G19 769 aaPredicted RBP8.96□□□□□ -0.98
CDKL5-209ENST00000635828 XYLT1Q86Y38 959 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 SPATA17Q96L03 361 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 SLC4A5Q9BY07 1137 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 SLITRK6Q9H5Y7 841 aa8.96□□□□□ -0.98
CDKL5-209ENST00000635828 WDR6Q9NNW5 1121 aaKnown RBP8.96□□□□□ -0.98
CDKL5-209ENST00000635828 ASAH2Q9NR71 780 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms