RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ANO4Q32M45 955 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CASC4Q6P4E1 433 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ZDHHC24Q6UX98 284 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 LCA5Q86VQ0 697 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CMASQ8NFW8 434 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 URGCPQ8TCY9 931 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 C9orf72Q96LT7 481 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 VCX3BQ9H321 246 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 NDE1Q9NXR1 346 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 SNTG2Q9NY99 539 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 GIT1Q9Y2X7 761 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TRPV2Q9Y5S1 764 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 BAZ2BQ9UIF8 2168 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 H2AFYO75367 372 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ARF4P18085 180 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 NOS2P35228 1153 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 RFC1P35251 1148 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 DEUP1Q05D60 604 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CCDC6Q16204 474 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 LONRF1Q17RB8 773 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 EEF1DP3Q658K8 133 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF449Q6P9G9 518 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 C1orf127Q8N9H9 656 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 SH3TC2Q8TF17 1288 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 FAM172AQ8WUF8 416 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF516Q92618 1163 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 PDZD7Q9H5P4 517 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ZC3H7BQ9UGR2 993 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 APOBEC2Q9Y235 224 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 STARD13Q9Y3M8 1113 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 BCLAF3A2AJT9 711 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 HOXA2O43364 376 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 EGFRP00533 1210 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 PECAM1P16284 738 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ATP4AP20648 1035 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CCDC15Q0P6D6 951 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ELAVL2Q12926 359 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 NOMO1Q15155 1222 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 PTPN20Q4JDL3 420 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TTC27Q6P3X3 843 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CRLF3Q8IUI8 442 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 RNF139Q8WU17 664 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 BTBD6Q96KE9 485 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 NAALADL1Q9UQQ1 740 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 SF3B1O75533 1304 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 DAB1O75553 588 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TRUB2O95900 331 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TLK2Q86UE8 772 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 XYLT1Q86Y38 959 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CCDC117Q8IWD4 279 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 UBR7Q8N806 425 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ZSWIM2Q8NEG5 633 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CATSPERBQ9H7T0 1116 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 RAB6BQ9NRW1 208 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 KANSL3Q9P2N6 904 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 F8VP50 259 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 LPXNO60711 386 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ANXA9O76027 345 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 MMP3P08254 477 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 KCNE1P15382 129 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TPSB2P20231 275 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TPSAB1Q15661 275 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 LACTB2Q53H82 288 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 C3orf62Q6ZUJ4 267 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ADGRF2Q8IZF7 708 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CCNYQ8ND76 341 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 SCG3Q8WXD2 468 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 OXCT2Q9BYC2 517 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 FNIP2Q9P278 1114 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 KLHL8Q9P2G9 620 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 AP4E1Q9UPM8 1137 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 GRIN2DO15399 1336 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 H0YGN5 161 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 XPO1O14980 1071 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TSPAN1O60635 241 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 LRCH4O75427 683 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 POLBP06746 335 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 RARBP10826 455 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 GRK2P25098 689 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CDKN2BP42772 138 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 HIRAP54198 1017 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 GRB14Q14449 540 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 SNX17Q15036 470 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 NFE2Q16621 373 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TTC19Q6DKK2 380 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TMEM110Q86TL2 294 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CFAP61Q8NHU2 1237 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 MGARPQ8TDB4 240 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 DEPDC1BQ8WUY9 529 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ATG4AQ8WYN0 398 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 VPS39Q96JC1 886 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 PCYT2Q99447 389 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 APOL6Q9BWW8 343 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 FHDC1Q9C0D6 1143 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF180Q9UJW8 692 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TLK1Q9UKI8 766 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 NFS1Q9Y697 457 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 KCNN4O15554 427 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DNAJC8O75937 253 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms