RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 UBE2TQ9NPD8 197 aaPredicted RBP21.81■■□□□ 1.08
CIRBP-246ENST00000628979 DUS2Q9NX74 493 aaKnown RBP21.81■■□□□ 1.08
CIRBP-246ENST00000628979 TSPAN16Q9UKR8 245 aa21.81■■□□□ 1.08
CIRBP-246ENST00000628979 WNT6Q9Y6F9 365 aa21.81■■□□□ 1.08
CIRBP-246ENST00000628979 SHISA7A6NL88 538 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 RNF225M0QZC1 329 aaPredicted RBP21.8■■□□□ 1.08
CIRBP-246ENST00000628979 LEFTY2O00292 366 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 CYP26A1O43174 497 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 VDRP11473 427 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 PRKCSHP14314 528 aaPredicted RBP21.8■■□□□ 1.08
CIRBP-246ENST00000628979 IFNAR2P48551 515 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 PGFP49763 221 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 SLC8A3P57103 927 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 SLC7A9P82251 487 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 USP4Q13107 963 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 RUNX3Q13761 415 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 ITPRIPL2Q3MIP1 535 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 GBP6Q6ZN66 633 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 ANKRD52Q8NB46 1076 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 UBA3Q8TBC4 463 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 NACA2Q9H009 215 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 HPS4Q9NQG7 708 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 TLR8Q9NR97 1041 aaKnown RBP21.8■■□□□ 1.08
CIRBP-246ENST00000628979 SAMSN1Q9NSI8 373 aaKnown RBP21.8■■□□□ 1.08
CIRBP-246ENST00000628979 HESX1Q9UBX0 185 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 SCML2Q9UQR0 700 aa21.8■■□□□ 1.08
CIRBP-246ENST00000628979 FAM92AA1XBS5 289 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 SPECC1L-ADORA2AF8WAN1 911 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 PES1O00541 588 aaKnown RBP21.79■■□□□ 1.08
CIRBP-246ENST00000628979 NCAM2O15394 837 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 COCHO43405 550 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 KRT5P13647 590 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 SLC9A1P19634 815 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 ZXDBP98169 803 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 GCNT1Q02742 428 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 MAN2A1Q16706 1144 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 CCDC183Q5T5S1 534 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 GJB7Q6PEY0 223 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 RBM43Q6ZSC3 357 aaKnown RBP21.79■■□□□ 1.08
CIRBP-246ENST00000628979 TTC30AQ86WT1 665 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 RBBP8NLQ8NC74 664 aaPredicted RBP21.79■■□□□ 1.08
CIRBP-246ENST00000628979 OSCP1Q8WVF1 389 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 KREMEN1Q96MU8 473 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 OSBPL6Q9BZF3 934 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 LINC00597Q9H2U6 94 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 PNPLA8Q9NP80 782 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 DLGAP2Q9P1A6 1054 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 KIAA1257Q9ULG3 409 aa21.79■■□□□ 1.08
CIRBP-246ENST00000628979 A0A1W2PQH9 124 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 KCNJ18B7U540 433 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 SCAMP3O14828 347 aaKnown RBP21.78■■□□□ 1.08
CIRBP-246ENST00000628979 PAEPP09466 180 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 ZDHHC11BP0C7U3 371 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 KIF11P52732 1056 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 APBA1Q02410 837 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 KCNJ12Q14500 433 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 PDGFRLQ15198 375 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 EXOC3L4Q17RC7 722 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 CT47A1Q5JQC4 288 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-246ENST00000628979 SNX30Q5VWJ9 437 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 PIGZQ86VD9 579 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 TFAP2BQ92481 460 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 ATOH1Q92858 354 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-246ENST00000628979 TUBGCP2Q9BSJ2 902 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 CFAP97Q9P2B7 532 aa21.78■■□□□ 1.08
CIRBP-246ENST00000628979 OTOL1A6NHN0 477 aaPredicted RBP21.77■■□□□ 1.08
CIRBP-246ENST00000628979 TULP2O00295 520 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 OLFM2O95897 454 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 BRD2P25440 801 aaKnown RBP21.77■■□□□ 1.08
CIRBP-246ENST00000628979 CTHP32929 405 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 BCAT1P54687 386 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 MLLT6P55198 1093 aaPredicted RBP21.77■■□□□ 1.08
CIRBP-246ENST00000628979 PDE4CQ08493 712 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 PON2Q15165 354 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 ARHGAP44Q17R89 818 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 VWA3BQ502W6 1294 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 TRIM65Q6PJ69 517 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 TXNDC11Q6PKC3 985 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 RALGPS2Q86X27 583 aaPredicted RBP21.77■■□□□ 1.08
CIRBP-246ENST00000628979 MSANTD3Q96H12 275 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 LMAN1LQ9HAT1 526 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 NMUR1Q9HB89 426 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 FAM86C1Q9NVL1 165 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 SPATA6Q9NWH7 488 aaPredicted RBP21.77■■□□□ 1.08
CIRBP-246ENST00000628979 NAGPAQ9UK23 515 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 NFE2L3Q9Y4A8 694 aa21.77■■□□□ 1.08
CIRBP-246ENST00000628979 WDFY4Q6ZS81 3184 aa21.77■■□□□ 1.07
CIRBP-246ENST00000628979 O00370 1275 aa21.76■■□□□ 1.07
CIRBP-246ENST00000628979 TLR5O60602 858 aa21.76■■□□□ 1.07
CIRBP-246ENST00000628979 TBX18O95935 607 aa21.76■■□□□ 1.07
CIRBP-246ENST00000628979 IRF1P10914 325 aa21.76■■□□□ 1.07
CIRBP-246ENST00000628979 TCF3P15923 654 aa21.76■■□□□ 1.07
CIRBP-246ENST00000628979 MFAP3P55082 362 aa21.76■■□□□ 1.07
CIRBP-246ENST00000628979 NHLH1Q02575 133 aa21.76■■□□□ 1.07
CIRBP-246ENST00000628979 BST2Q10589 180 aaKnown RBP21.76■■□□□ 1.07
CIRBP-246ENST00000628979 ANGPT1Q15389 498 aa21.76■■□□□ 1.07
CIRBP-246ENST00000628979 C11orf57Q6ZUT1 292 aaPredicted RBP21.76■■□□□ 1.07
CIRBP-246ENST00000628979 CPA6Q8N4T0 437 aa21.76■■□□□ 1.07
CIRBP-246ENST00000628979 ENOX1Q8TC92 643 aaKnown RBP21.76■■□□□ 1.07
CIRBP-246ENST00000628979 UBXN6Q9BZV1 441 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms