RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 GYPCP04921 128 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 MYL4P12829 197 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 SLC5A3P53794 718 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 PDE4CQ08493 712 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 IFRD2Q12894 506 aaPredicted RBP15.52■□□□□ 0.08
PNKP-221ENST00000627317 MEA1Q16626 185 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 FAM78AQ5JUQ0 283 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 SFMBT2Q5VUG0 894 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 TAF3Q5VWG9 929 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 DENND1BQ6P3S1 775 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 TMC6Q7Z403 805 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 NOP9Q86U38 636 aaKnown RBP15.52■□□□□ 0.08
PNKP-221ENST00000627317 PASD1Q8IV76 773 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 SIX5Q8N196 739 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 NUP93Q8N1F7 819 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 TMEM105Q8N8V8 129 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 ZMIZ2Q8NF64 920 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 PRSS33Q8NF86 280 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 MRFAP1L1Q96HT8 127 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 ZSWIM3Q96MP5 696 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 KXD1Q9BQD3 176 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 NUCKS1Q9H1E3 243 aaKnown RBP15.52■□□□□ 0.08
PNKP-221ENST00000627317 ZNF334Q9HCZ1 680 aaPredicted RBP15.52■□□□□ 0.08
PNKP-221ENST00000627317 PNPLA8Q9NP80 782 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 UXTQ9UBK9 157 aaPredicted RBP15.52■□□□□ 0.08
PNKP-221ENST00000627317 CAPN11Q9UMQ6 739 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 LUC7L2Q9Y383 392 aaKnown RBP15.52■□□□□ 0.08
PNKP-221ENST00000627317 PATJQ8NI35 1801 aa15.52■□□□□ 0.07
PNKP-221ENST00000627317 ZNF197O14709 1029 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 FGF19O95750 216 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 CFHP08603 1231 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 AVPR2P30518 371 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 ZBED6P86452 979 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 GAREM2Q75VX8 874 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 PIGZQ86VD9 579 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 ZNF677Q86XU0 584 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 SECISBP2LQ93073 1101 aaKnown RBP15.51■□□□□ 0.07
PNKP-221ENST00000627317 MCRS1Q96EZ8 462 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 TRMT2BQ96GJ1 504 aaKnown RBP15.51■□□□□ 0.07
PNKP-221ENST00000627317 ASB16Q96NS5 453 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 PLA2G2FQ9BZM2 168 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 TRPV4Q9HBA0 871 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 IL21Q9HBE4 155 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 PCDHGC3Q9UN70 934 aa15.51■□□□□ 0.07
PNKP-221ENST00000627317 CACNA1HO95180 2353 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 GOLGA6L3A6NEY3 463 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 HMGA1P17096 107 aaKnown RBP15.5■□□□□ 0.07
PNKP-221ENST00000627317 GJA1P17302 382 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 YWHAQP27348 245 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 GABRR2P28476 465 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 CDC25CP30307 473 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 CASP14P31944 242 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 PLA2G4AP47712 749 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 CLCN5P51795 746 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 USP46P62068 366 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 GPC5P78333 572 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 PKDCCQ504Y2 493 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 ASTLQ6HA08 431 aaPredicted RBP15.5■□□□□ 0.07
PNKP-221ENST00000627317 TANGO2Q6ICL3 276 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 GPRIN1Q7Z2K8 1008 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 SLC20A1Q8WUM9 679 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 FBXO32Q969P5 355 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 ELSPBP1Q96BH3 223 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 SLITRK1Q96PX8 696 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 TTLL2Q9BWV7 592 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 FBXO44Q9H4M3 255 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 LRRC4Q9HBW1 653 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 NOCTQ9UK39 431 aaKnown RBP15.5■□□□□ 0.07
PNKP-221ENST00000627317 PIEZO1Q92508 2521 aa15.5■□□□□ 0.07
PNKP-221ENST00000627317 COL4A3Q01955 1670 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 A0A1W2PRU2 124 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 HHLA1C9JL84 531 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 TULP2O00295 520 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 TNFRSF10BO14763 440 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 MMEP08473 750 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 RGS7P49802 495 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 CDR2Q01850 454 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 TCF15Q12870 199 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 TEAD2Q15562 447 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 STXBP5Q5T5C0 1151 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 TMEM150AQ86TG1 271 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 SIX6OS1Q8N1H7 587 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 TMEM35BQ8NCS4 154 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 SCAMP5Q8TAC9 235 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 DDX1Q92499 740 aaKnown RBP15.49■□□□□ 0.07
PNKP-221ENST00000627317 SMARCD2Q92925 531 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 RSPRY1Q96DX4 576 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 MYRFLQ96LU7 910 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 NOX5Q96PH1 765 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 UBXN6Q9BZV1 441 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 LHX5Q9H2C1 402 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 ARHGEF3Q9NR81 526 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 ST7Q9NRC1 585 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 SEPT11Q9NVA2 429 aaKnown RBP15.49■□□□□ 0.07
PNKP-221ENST00000627317 COMMD8Q9NX08 183 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 AIPL1Q9NZN9 384 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 FBXL21Q9UKT6 434 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 GREB1Q4ZG55 1949 aa15.49■□□□□ 0.07
PNKP-221ENST00000627317 COL4A2P08572 1712 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 MYO15AQ9UKN7 3530 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms