RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 DUS2Q9NX74 493 aaKnown RBP23.63■■□□□ 1.37
SF1-220ENST00000626028 NDRG2Q9UN36 371 aaKnown RBP23.63■■□□□ 1.37
SF1-220ENST00000626028 SCML2Q9UQR0 700 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 SLC9A3R1O14745 358 aaPredicted RBP23.62■■□□□ 1.37
SF1-220ENST00000626028 LAMTOR5O43504 91 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 ABL1P00519 1130 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 CHRNB1P11230 501 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 ADORA2BP29275 332 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 SLC8A3P57103 927 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 TNK2Q07912 1038 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 PPP1R26Q5T8A7 1209 aaPredicted RBP23.62■■□□□ 1.37
SF1-220ENST00000626028 ZC3H14Q6PJT7 736 aaKnown RBP23.62■■□□□ 1.37
SF1-220ENST00000626028 RIN3Q8TB24 985 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 NT5C1BQ96P26 610 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 RNF38Q9H0F5 515 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 EBF3Q9H4W6 596 aa23.62■■□□□ 1.37
SF1-220ENST00000626028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.62■■□□□ 1.37
SF1-220ENST00000626028 HHLA1C9JL84 531 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 IFNAR2P48551 515 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 PSEN1P49768 467 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 MRE11P49959 708 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 STX17P56962 302 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 KCNH2Q12809 1159 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 IFRD2Q12894 506 aaPredicted RBP23.61■■□□□ 1.37
SF1-220ENST00000626028 NR1H3Q13133 447 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 PPP2R5DQ14738 602 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 CT47A1Q5JQC4 288 aaPredicted RBP23.61■■□□□ 1.37
SF1-220ENST00000626028 SMYD5Q6GMV2 418 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 ZNF276Q8N554 614 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 JAKMIP2Q96AA8 810 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 FAM126AQ9BYI3 521 aaPredicted RBP23.61■■□□□ 1.37
SF1-220ENST00000626028 NUP62CLQ9H1M0 184 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 LMAN1LQ9HAT1 526 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 MYOFQ9NZM1 2061 aa23.61■■□□□ 1.37
SF1-220ENST00000626028 LEFTY2O00292 366 aa23.6■■□□□ 1.37
SF1-220ENST00000626028 TRDMT1O14717 391 aaKnown RBP23.6■■□□□ 1.37
SF1-220ENST00000626028 AFPP02771 609 aaKnown RBP23.6■■□□□ 1.37
SF1-220ENST00000626028 PRKCSHP14314 528 aaPredicted RBP23.6■■□□□ 1.37
SF1-220ENST00000626028 ZNF394Q53GI3 561 aa23.6■■□□□ 1.37
SF1-220ENST00000626028 ANKRD52Q8NB46 1076 aa23.6■■□□□ 1.37
SF1-220ENST00000626028 LMO3Q8TAP4 145 aa23.6■■□□□ 1.37
SF1-220ENST00000626028 ECT2Q9H8V3 914 aa23.6■■□□□ 1.37
SF1-220ENST00000626028 PRMT8Q9NR22 394 aaPredicted RBP23.6■■□□□ 1.37
SF1-220ENST00000626028 TBC1D14Q9P2M4 693 aa23.6■■□□□ 1.37
SF1-220ENST00000626028 CHORDC1Q9UHD1 332 aaPredicted RBP23.6■■□□□ 1.37
SF1-220ENST00000626028 DACH1Q9UI36 760 aa23.6■■□□□ 1.37
SF1-220ENST00000626028 KIAA1549LQ6ZVL6 1849 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 COCHO43405 550 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 NFATC1O95644 943 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 PAEPP09466 180 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 SP9P0CG40 484 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 SOX9P48436 509 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 KIF11P52732 1056 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 GCNT1Q02742 428 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 CCINQ13939 588 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 EML3Q32P44 896 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 TXNDC11Q6PKC3 985 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 CCDC186Q7Z3E2 898 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 MAML2Q8IZL2 1156 aaPredicted RBP23.59■■□□□ 1.37
SF1-220ENST00000626028 UBR7Q8N806 425 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 OTUB2Q96DC9 234 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 CYLDQ9NQC7 956 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 LMBRD1Q9NUN5 540 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 GMIPQ9P107 970 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 CPQQ9Y646 472 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 USP3Q9Y6I4 520 aa23.59■■□□□ 1.37
SF1-220ENST00000626028 USP34Q70CQ2 3546 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 E2F8A0AVK6 867 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 GOLGA6L22H0YM25 854 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 MBL2P11226 248 aaPredicted RBP23.58■■□□□ 1.37
SF1-220ENST00000626028 ERCC5P28715 1186 aaPredicted RBP23.58■■□□□ 1.37
SF1-220ENST00000626028 CCR3P51677 355 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 ZXDBP98169 803 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 MTAPQ13126 283 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 SGO2Q562F6 1265 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 TMEM196Q5HYL7 178 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 TRIM68Q6AZZ1 485 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 KLHDC10Q6PID8 442 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 SPEM1Q8N4L4 309 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 FAM81BQ96LP2 452 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 CDK5RAP1Q96SZ6 601 aaKnown RBP23.58■■□□□ 1.37
SF1-220ENST00000626028 FAM86C1Q9NVL1 165 aa23.58■■□□□ 1.37
SF1-220ENST00000626028 ATG2BQ96BY7 2078 aa23.58■■□□□ 1.36
SF1-220ENST00000626028 MYO15AQ9UKN7 3530 aa23.57■■□□□ 1.36
SF1-220ENST00000626028 OTOL1A6NHN0 477 aaPredicted RBP23.57■■□□□ 1.36
SF1-220ENST00000626028 VDRP11473 427 aa23.57■■□□□ 1.36
SF1-220ENST00000626028 ARSAP15289 507 aa23.57■■□□□ 1.36
SF1-220ENST00000626028 ACO1P21399 889 aaKnown RBP23.57■■□□□ 1.36
SF1-220ENST00000626028 BCAT1P54687 386 aa23.57■■□□□ 1.36
SF1-220ENST00000626028 GRSF1Q12849 480 aaKnown RBP eCLIP23.57■■□□□ 1.36
SF1-220ENST00000626028 TADA2BQ86TJ2 420 aa23.57■■□□□ 1.36
SF1-220ENST00000626028 ALYREFQ86V81 257 aaKnown RBP23.57■■□□□ 1.36
SF1-220ENST00000626028 PPM1KQ8N3J5 372 aa23.57■■□□□ 1.36
SF1-220ENST00000626028 EHBP1Q8NDI1 1231 aa23.57■■□□□ 1.36
SF1-220ENST00000626028 IPO9Q96P70 1041 aaKnown RBP23.57■■□□□ 1.36
SF1-220ENST00000626028 CLIC5Q9NZA1 410 aa23.57■■□□□ 1.36
SF1-220ENST00000626028 WNT6Q9Y6F9 365 aa23.57■■□□□ 1.36
SF1-220ENST00000626028 ZFHX2Q9C0A1 2572 aaPredicted RBP23.56■■□□□ 1.36
SF1-220ENST00000626028 TLR5O60602 858 aa23.56■■□□□ 1.36
SF1-220ENST00000626028 PAPSS2O95340 614 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms