RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ZNF33AQ06730 810 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 C10orf76Q5T2E6 689 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 TDRD10Q5VZ19 366 aaKnown RBP15.65■□□□□ 0.1
PNKP-218ENST00000625299 BTBD8Q5XKL5 378 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 SLC36A4Q6YBV0 504 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 PROSER1Q86XN7 944 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 DDX42Q86XP3 938 aaKnown RBP eCLIP15.65■□□□□ 0.1
PNKP-218ENST00000625299 OR5B17Q8NGF7 314 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 EPSTI1Q96J88 318 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 CAMK1GQ96NX5 476 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 SLITRK1Q96PX8 696 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 KIF2CQ99661 725 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 TTLL2Q9BWV7 592 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 STRA6Q9BX79 667 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 CAPN10Q9HC96 672 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 CALCOCO1Q9P1Z2 691 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 SEL1LQ9UBV2 794 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 PTPRJQ12913 1337 aa15.65■□□□□ 0.1
PNKP-218ENST00000625299 OLFM2O95897 454 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 BMP15O95972 392 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 OAS1P00973 400 aaKnown RBP15.64■□□□□ 0.09
PNKP-218ENST00000625299 NEFLP07196 543 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 IDEP14735 1019 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 GAP43P17677 238 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 GABRG2P18507 467 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 NOP14P78316 857 aaKnown RBP15.64■□□□□ 0.09
PNKP-218ENST00000625299 GAD2Q05329 585 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 SF3A1Q15459 793 aaKnown RBP15.64■□□□□ 0.09
PNKP-218ENST00000625299 ZNF423Q2M1K9 1284 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 ANO4Q32M45 955 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 USP49Q70CQ1 688 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 DPH6Q7L8W6 267 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 TRMT11Q7Z4G4 463 aaKnown RBP15.64■□□□□ 0.09
PNKP-218ENST00000625299 RABEPKQ7Z6M1 372 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 MYCBPAPQ8TBZ2 947 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 CEP295NLQ96MC4 621 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 HSPA12BQ96MM6 686 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 SNX25Q9H3E2 840 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 INTS13Q9NVM9 706 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 TBC1D14Q9P2M4 693 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 CYP8B1Q9UNU6 501 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 SH3BP1Q9Y3L3 701 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 PCDHB9Q9Y5E1 797 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 PCDHB13Q9Y5F0 798 aa15.64■□□□□ 0.09
PNKP-218ENST00000625299 ITPR1Q14643 2758 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 ARHGAP33O14559 1287 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 ZBTB24O43167 697 aaPredicted RBP15.63■□□□□ 0.09
PNKP-218ENST00000625299 TULP3O75386 442 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 CD59P13987 128 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 WARSP23381 471 aaKnown RBP15.63■□□□□ 0.09
PNKP-218ENST00000625299 CACNA2D1P54289 1103 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 SCAPQ12770 1279 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 RAB44Q7Z6P3 723 aaPredicted RBP15.63■□□□□ 0.09
PNKP-218ENST00000625299 RGL4Q8IZJ4 473 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 GPD1LQ8N335 351 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 PHTF2Q8N3S3 785 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 KIAA1958Q8N8K9 716 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 TRIML1Q8N9V2 468 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 OR6B3Q8NGW1 331 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 C8orf48Q96LL4 319 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 MRPL45Q9BRJ2 306 aaKnown RBP15.63■□□□□ 0.09
PNKP-218ENST00000625299 FGFBP2Q9BYJ0 223 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 DEC1Q9P2X7 70 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 STK17AQ9UEE5 414 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 CCDC39Q9UFE4 941 aa15.63■□□□□ 0.09
PNKP-218ENST00000625299 A0A0A0MRY4 1105 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 IGHV1OR15-9A0A0B4J2B8 117 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 SH3BP5O60239 455 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 PRPF6O94906 941 aaKnown RBP15.62■□□□□ 0.09
PNKP-218ENST00000625299 SYPP08247 313 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 IRF1P10914 325 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 GNL1P36915 607 aaPredicted RBP15.62■□□□□ 0.09
PNKP-218ENST00000625299 TRIP6Q15654 476 aaKnown RBP15.62■□□□□ 0.09
PNKP-218ENST00000625299 PLEKHG6Q3KR16 790 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 NUDT18Q6ZVK8 323 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 SV2BQ7L1I2 683 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 LIMS2Q7Z4I7 341 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 SLC41A1Q8IVJ1 513 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 PNPLA1Q8N8W4 532 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 FBXO32Q969P5 355 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 DNAJC19Q96DA6 116 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 ZNF518BQ9C0D4 1074 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 DPEP3Q9H4B8 488 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 GPSM3Q9Y4H4 160 aa15.62■□□□□ 0.09
PNKP-218ENST00000625299 E2F8A0AVK6 867 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 FAM221BA6H8Z2 402 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 CLDN5O00501 218 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 TRIM24O15164 1050 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 COCHO43405 550 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 FTH1P19P0C7X4 201 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 NDUFV2P19404 249 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 YWHAQP27348 245 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 NTSR1P30989 418 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 HNRNPDQ14103 355 aaKnown RBP15.61■□□□□ 0.09
PNKP-218ENST00000625299 DUOXA2Q1HG44 320 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 COL28A1Q2UY09 1125 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 PREPLQ4J6C6 727 aaPredicted RBP15.61■□□□□ 0.09
PNKP-218ENST00000625299 RRAGBQ5VZM2 374 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 EGFLAMQ63HQ2 1017 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 PDZD3Q86UT5 571 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms