RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 MAN1A1P33908 653 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 PIK3CAP42336 1068 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 LIG4P49917 911 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 NLRP11P59045 1033 aaKnown RBP12.97□□□□□ -0.33
LITAF-221ENST00000622633 CNGA3Q16281 694 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 PPP2R2DQ66LE6 453 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 CGB2Q6NT52 195 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 GRAMD2AQ8IUY3 354 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 FNBP1Q96RU3 617 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 NEURL2Q9BR09 285 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 PDLIM7Q9NR12 457 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 RNF146Q9NTX7 359 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 NUMBLQ9Y6R0 609 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 PTPRJQ12913 1337 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 COL4A5P29400 1685 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 FAM47E-STBD1D6RA91 191 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 C4BPAP04003 597 aaKnown RBP12.97□□□□□ -0.33
LITAF-221ENST00000622633 T-ENOLP0DO92 83 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 CCND2P30279 289 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 CAV1Q03135 178 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 CENPCQ03188 943 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 KLF1Q13351 362 aaPredicted RBP12.97□□□□□ -0.33
LITAF-221ENST00000622633 MAMLD1Q13495 774 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 ACSBG2Q5FVE4 666 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 LIN9Q5TKA1 542 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 FAM117BQ6P1L5 589 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 TMEM270Q6UE05 265 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 OSTM1Q86WC4 334 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 FAM20CQ8IXL6 584 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 TTLL6Q8N841 843 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 RDM1Q8NG50 284 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 ZBTB45Q96K62 511 aaPredicted RBP12.97□□□□□ -0.33
LITAF-221ENST00000622633 OSBPL8Q9BZF1 889 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 APOBEC3GQ9HC16 384 aaKnown RBP12.97□□□□□ -0.33
LITAF-221ENST00000622633 KLHL11Q9NVR0 708 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 NAALADL1Q9UQQ1 740 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 PCDHB4Q9Y5E5 795 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 ZNFX1Q9P2E3 1918 aaKnown RBP12.97□□□□□ -0.33
LITAF-221ENST00000622633 GOLGA8TH3BQL2 631 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 VWA5AO00534 786 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 VNN1O95497 513 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 FDX1P10109 184 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 PIM1P11309 404 aaPredicted RBP12.96□□□□□ -0.33
LITAF-221ENST00000622633 ACO1P21399 889 aaKnown RBP12.96□□□□□ -0.33
LITAF-221ENST00000622633 ATP5DP30049 168 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 PSMD6Q15008 389 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 CCNG2Q16589 344 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 MYLK3Q32MK0 819 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 ZACNQ401N2 412 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 MTERF2Q49AM1 385 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 ATP13A4Q4VNC1 1196 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 IZUMO3Q5VZ72 239 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 DSTYKQ6XUX3 929 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 ZNF677Q86XU0 584 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 CCDC60Q8IWA6 550 aaPredicted RBP12.96□□□□□ -0.33
LITAF-221ENST00000622633 RHOT1Q8IXI2 618 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 MTMR14Q8NCE2 650 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.96□□□□□ -0.33
LITAF-221ENST00000622633 CKAP2Q8WWK9 683 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 SKA1Q96BD8 255 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 FHDC1Q9C0D6 1143 aaPredicted RBP12.96□□□□□ -0.33
LITAF-221ENST00000622633 CYP26B1Q9NR63 512 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 KLHL14Q9P2G3 628 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.33
LITAF-221ENST00000622633 FUOMA2VDF0 154 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 PI4K2BG5E9Z4 385 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 DGAT1O75907 488 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 RGS20O76081 388 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 PCSK6P29122 969 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 PRKCEQ02156 737 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 ANKDD1AQ495B1 522 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 KAZNQ674X7 775 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 SCARA3Q6AZY7 606 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 KLHDC10Q6PID8 442 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 RBM44Q6ZP01 1051 aaKnown RBP12.96□□□□□ -0.34
LITAF-221ENST00000622633 GSTA5Q7RTV2 222 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 VSIG1Q86XK7 387 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 SRRM1Q8IYB3 904 aaKnown RBP12.96□□□□□ -0.34
LITAF-221ENST00000622633 MCPH1Q8NEM0 835 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 DTX3LQ8TDB6 740 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 GIPC3Q8TF64 312 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 TMEM143Q96AN5 459 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 ZBED3Q96IU2 234 aaPredicted RBP12.96□□□□□ -0.34
LITAF-221ENST00000622633 VPS50Q96JG6 964 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 HAPLN2Q9GZV7 340 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 TLE6Q9H808 572 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 ARHGAP28Q9P2N2 729 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 STX18Q9P2W9 335 aaKnown RBP12.96□□□□□ -0.34
LITAF-221ENST00000622633 ZNRF3Q9ULT6 936 aa12.96□□□□□ -0.34
LITAF-221ENST00000622633 ZNF541Q9H0D2 1346 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 OPHN1O60890 802 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 PSAPP07602 524 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 MARK3P27448 753 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 NOMO3P69849 1222 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 CXCL9Q07325 125 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 PTP4A2Q12974 167 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 CUL2Q13617 745 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms