RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 MYOGP15173 224 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 PRLRP16471 622 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 CXCR5P32302 372 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 OR1D2P34982 312 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 CTNNA1P35221 906 aaKnown RBP11.18□□□□□ -0.62
CPNE3-212ENST00000621783 BMPR1AP36894 532 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 ZNF143P52747 638 aaPredicted RBP11.18□□□□□ -0.62
CPNE3-212ENST00000621783 SLC5A3P53794 718 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 TAS2R40P59535 323 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 PIGHQ14442 188 aaPredicted RBP11.18□□□□□ -0.62
CPNE3-212ENST00000621783 EFHC1Q5JVL4 640 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 SDHAF4Q5VUM1 108 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 BHLHA9Q7RTU4 235 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 SPRED2Q7Z698 418 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 GPR65Q8IYL9 337 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 STKLD1Q8NE28 680 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 COG1Q8WTW3 980 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 RXFP2Q8WXD0 754 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 KRT35Q92764 455 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 SEPT5Q99719 369 aaPredicted RBP11.18□□□□□ -0.62
CPNE3-212ENST00000621783 CLSTN3Q9BQT9 956 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 C17orf80Q9BSJ5 609 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 PLVAPQ9BX97 442 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 MRPL17Q9NRX2 175 aaKnown RBP11.18□□□□□ -0.62
CPNE3-212ENST00000621783 ASNSD1Q9NWL6 643 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 MKI67P46013 3256 aaKnown RBP11.17□□□□□ -0.62
CPNE3-212ENST00000621783 CCDC66A2RUB6 948 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 KCNK3O14649 394 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
CPNE3-212ENST00000621783 TNFRSF10BO14763 440 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 PSTPIP1O43586 416 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 LILRB3O75022 631 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 ZBED1O96006 694 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 CA3P07451 260 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 GLI1P08151 1106 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 PDGFRAP16234 1089 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 CA8P35219 290 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 CREMQ03060 361 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 IFRD2Q12894 506 aaPredicted RBP11.17□□□□□ -0.62
CPNE3-212ENST00000621783 DUSP4Q13115 394 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 TUBB2AQ13885 445 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 RAB33AQ14088 237 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 DDR2Q16832 855 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 WHAMMP3Q1A5X7 153 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
CPNE3-212ENST00000621783 MGAT5BQ3V5L5 792 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 DCAF12L1Q5VU92 463 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 CC2D1AQ6P1N0 951 aaPredicted RBP11.17□□□□□ -0.62
CPNE3-212ENST00000621783 HFE2Q6ZVN8 426 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 ARCQ7LC44 396 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 SCML4Q8N228 414 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 UBL4BQ8N7F7 174 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 SCAMP5Q8TAC9 235 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 UBE2Q2Q8WVN8 375 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 IRGQQ8WZA9 623 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 ALG3Q92685 438 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 FAM149B1Q96BN6 582 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 CAPZA3Q96KX2 299 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 CFAP57Q96MR6 1250 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 SLC2A13Q96QE2 648 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 GDF15Q99988 308 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 CNPY3Q9BT09 278 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 TUBB2BQ9BVA1 445 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 UBE2OQ9C0C9 1292 aaKnown RBP11.17□□□□□ -0.62
CPNE3-212ENST00000621783 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.17□□□□□ -0.62
CPNE3-212ENST00000621783 FNIP2Q9P278 1114 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 AFF4Q9UHB7 1163 aaKnown RBP11.17□□□□□ -0.62
CPNE3-212ENST00000621783 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 SSX2IPQ9Y2D8 614 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 SLC27A5Q9Y2P5 690 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 PCDHA3Q9Y5H8 950 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 USP3Q9Y6I4 520 aa11.17□□□□□ -0.62
CPNE3-212ENST00000621783 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.16□□□□□ -0.62
CPNE3-212ENST00000621783 YJEFN3A6XGL0 299 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 E7ENQ6 273 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 C5orf67F2Z3F1 127 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 CES2O00748 559 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 LRCH4O75427 683 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 ABLIM3O94929 683 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 SEC24AO95486 1093 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 TCF4P15884 667 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 ATF6P18850 670 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 SDC4P31431 198 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 GJC1P36383 396 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 SSR1P43307 286 aaKnown RBP11.16□□□□□ -0.62
CPNE3-212ENST00000621783 PTPN9P43378 593 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 SULT1E1P49888 294 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 PEX5P50542 639 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 RPL10AP62906 217 aaKnown RBP11.16□□□□□ -0.62
CPNE3-212ENST00000621783 SLC25A11Q02978 314 aaKnown RBP11.16□□□□□ -0.62
CPNE3-212ENST00000621783 CDO1Q16878 200 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 CCDC14Q49A88 953 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 TPGS2Q68CL5 300 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 PM20D1Q6GTS8 502 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 CREG2Q8IUH2 290 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 RHOT1Q8IXI2 618 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 DEFB106AQ8N104 65 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 NUP93Q8N1F7 819 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 ARFGAP1Q8N6T3 406 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms