RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 TBC1D12O60347 775 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 STAM2O75886 525 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 SUPT20HL2P0C7V6 817 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 TROVE2P10155 538 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDH1-214ENST00000621016 GARTP22102 1010 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ARPC4P59998 168 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 IRX4P78413 519 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 STXBP2Q15833 593 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 SUPT20HL1Q3ZLR7 823 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 RAB6CQ53S08 254 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 RHBDF2Q6PJF5 856 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ABHD15Q6UXT9 468 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 NIPA1Q7RTP0 329 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ECHDC2Q86YB7 292 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 RFX6Q8HWS3 928 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 TMEM192Q8IY95 271 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 NTPCRQ9BSD7 190 aaKnown RBP11.15□□□□□ -0.62
CDH1-214ENST00000621016 TEX13BQ9BXU2 312 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 RAB6CQ9H0N0 254 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ST6GALNAC4Q9H4F1 302 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ZNF214Q9UL59 606 aaPredicted RBP11.15□□□□□ -0.62
CDH1-214ENST00000621016 NOP56O00567 594 aaKnown RBP11.15□□□□□ -0.62
CDH1-214ENST00000621016 KRT36O76013 467 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 NAA20P61599 178 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 PSMC1P62191 440 aaKnown RBP11.15□□□□□ -0.62
CDH1-214ENST00000621016 OTUD4Q01804 1114 aaKnown RBP11.15□□□□□ -0.62
CDH1-214ENST00000621016 MGAT5Q09328 741 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 MMRN1Q13201 1228 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 CAPSQ13938 189 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 PSMD6Q15008 389 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 SLC1A5Q15758 541 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ZNF699Q32M78 642 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 KHDC1Q4VXA5 237 aaKnown RBP11.15□□□□□ -0.62
CDH1-214ENST00000621016 LIN52Q52LA3 116 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 SH3PXD2AQ5TCZ1 1133 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 FOCADQ5VW36 1801 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 NPNTQ6UXI9 565 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 CROCCP2Q86T23 111 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 KCTD6Q8NC69 237 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 CKAP2Q8WWK9 683 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 CASP10Q92851 521 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 CFAP57Q96MR6 1250 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ACAD9Q9H845 621 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 BTBD7Q9P203 1132 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 PHTF1Q9UMS5 762 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 TCRBV7S3A2A0A539 114 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 A6NL46 340 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 LIASO43766 372 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 PTPRAP18433 802 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 STIP1P31948 543 aaKnown RBP11.14□□□□□ -0.63
CDH1-214ENST00000621016 TCF7P36402 384 aaPredicted RBP11.14□□□□□ -0.63
CDH1-214ENST00000621016 STAT5BP51692 787 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ITIH4Q14624 930 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 GJC2Q5T442 439 aaPredicted RBP11.14□□□□□ -0.63
CDH1-214ENST00000621016 DENND1BQ6P3S1 775 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 RFWD3Q6PCD5 774 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 LVRNQ6Q4G3 990 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 PACS1Q6VY07 963 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 SPOCD1Q6ZMY3 1216 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ENOSF1Q7L5Y1 443 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ZBTB46Q86UZ6 589 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 AGBL3Q8NEM8 1001 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 SLITRK1Q96PX8 696 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 IP6K2Q9UHH9 426 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 CAPN9O14815 690 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 PLA2G6O60733 806 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 DDHD2O94830 711 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 KRT3P12035 628 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 TAC1P20366 129 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ADRA1DP25100 572 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 MZF1P28698 734 aaPredicted RBP11.14□□□□□ -0.63
CDH1-214ENST00000621016 RCVRNP35243 200 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 RGS7P49802 495 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ZNF252P-AS1Q0IIN9 211 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 KLF1Q13351 362 aaPredicted RBP11.14□□□□□ -0.63
CDH1-214ENST00000621016 MSS51Q4VC12 460 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 MFSD5Q6N075 450 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ZNF333Q96JL9 665 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 DENND2DQ9H6A0 471 aaPredicted RBP11.14□□□□□ -0.63
CDH1-214ENST00000621016 UBN1Q9NPG3 1134 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ARHGEF3Q9NR81 526 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 GPATCH2LQ9NWQ4 482 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 PIH1D1Q9NWS0 290 aaKnown RBP11.14□□□□□ -0.63
CDH1-214ENST00000621016 SELENONQ9NZV5 590 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 LRCH1Q9Y2L9 728 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 SCINQ9Y6U3 715 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 TXNDC9O14530 226 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ATP2A1O14983 1001 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 STBD1O95210 358 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 BAG2O95816 211 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 LYNP07948 512 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ACADSP16219 412 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 CLCN3P51790 818 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 YWHAGP61981 247 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDH1-214ENST00000621016 HIF1AQ16665 826 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 CGB2Q6NT52 195 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 GADL1Q6ZQY3 521 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 C12orf50Q8NA57 414 aaPredicted RBP11.14□□□□□ -0.63
CDH1-214ENST00000621016 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms