RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 YWHABP31946 246 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 FMO5P49326 533 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 PUDPQ08623 228 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 RWDD4Q6NW29 188 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 SZRD1Q7Z422 152 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CENPSQ8N2Z9 138 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CLIP4Q8N3C7 705 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 RBM15BQ8NDT2 890 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 DCPSQ96C86 337 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 SLC39A3Q9BRY0 314 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 ATP8A2Q9NTI2 1148 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 COPG2Q9UBF2 871 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 ATP6V1HQ9UI12 483 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 ARHGEF12Q9NZN5 1544 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 QARSP47897 775 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CDK7P50613 346 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 AAGABQ6PD74 315 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 KCNH5Q8NCM2 988 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 DHX38Q92620 1227 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TASP1Q9H6P5 420 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 SLC12A6Q9UHW9 1150 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 PSMA4P25789 261 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 LRPAP1P30533 357 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 BNIP3Q12983 259 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 PYDC2Q56P42 97 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 PIGWQ7Z7B1 504 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 SLFN12Q8IYM2 578 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 GLIS3Q8NEA6 775 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 AK8Q96MA6 479 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 LRRC4CQ9HCJ2 640 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 SLC9A2Q9UBY0 812 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 IGKV5-2P06315 115 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 POU1F1P28069 291 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 SSTR1P30872 391 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TSC22D1Q15714 1073 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 DGKKQ5KSL6 1271 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TLDC1Q6P9B6 456 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TTC30AQ86WT1 665 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TNS4Q8IZW8 715 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 KRT35Q92764 455 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 NSMCE4AQ9NXX6 385 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 DMTF1Q9Y222 760 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 HPSEQ9Y251 543 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 SLC9A8Q9Y2E8 581 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 ADGRA2Q96PE1 1338 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TRIP4Q15650 581 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SLC9A4Q6AI14 798 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TMPRSS6Q8IU80 811 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 OFCC1Q8IZS5 231 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CENPTQ96BT3 561 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ZSWIM1Q9BR11 485 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CEP41Q9BYV8 373 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CHST7Q9NS84 486 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 STK17AQ9UEE5 414 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 GGA1Q9UJY5 639 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 BTBD3Q9Y2F9 522 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ADGRA3Q8IWK6 1321 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 C16orf96A6NNT2 1141 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PIK3CDO00329 1044 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TIPRLO75663 272 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 NR4A2P43354 598 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 YAP1P46937 504 aaKnown RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 IL17AQ16552 155 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 DGKDQ16760 1214 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 RASSF6Q6ZTQ3 369 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TNIP2Q8NFZ5 429 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CD209Q9NNX6 404 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PTPRTO14522 1441 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 FAM149AA5PLN7 773 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TPBGLP0DKB5 382 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 THRAP10827 490 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 IL12AP29459 219 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CDH6P55285 790 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CTSWP56202 376 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PEX3P56589 373 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 EDRF1Q3B7T1 1238 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SLC27A3Q5K4L6 730 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 COLEC12Q5KU26 742 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 DHFR2Q86XF0 187 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 DCUN1D1Q96GG9 259 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SRPK1Q96SB4 655 aaKnown RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SETDB2Q96T68 719 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SPRTNQ9H040 489 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 MRPL39Q9NYK5 338 aaKnown RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CCDC182A6NF36 153 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 C9JVG2 144 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 POLRMTO00411 1230 aaKnown RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 HS6ST1O60243 411 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 LCP1P13796 627 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CDCA2Q69YH5 1023 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CYB5RLQ6IPT4 315 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 KLHL35Q6PF15 583 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SLC2A7Q6PXP3 512 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SAV1Q9H4B6 383 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 EFCAB1Q9HAE3 211 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ACP6Q9NPH0 428 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PNPOQ9NVS9 261 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ITGB1BP2Q9UKP3 347 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SOX13Q9UN79 622 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 A0A1W2PQJ5 194 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms