RNA–Protein interactions for RNA: ENST00000619290.4

CYFIP1-210, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-210ENST00000619290 ZCCHC9Q8N567 271 aaKnown RBP13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 MYCT1Q8N699 235 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 LSM14AQ8ND56 463 aaKnown RBP13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 IPO4Q8TEX9 1081 aaKnown RBP13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 C8orf76Q96K31 380 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 SPATA17Q96L03 361 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 ACOX2Q99424 681 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 MIR1-1HGQ9H1L0 117 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 PRORYQ9H606 182 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 CD248Q9HCU0 757 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 TBC1D14Q9P2M4 693 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 DEC1Q9P2X7 70 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 AGAP1Q9UPQ3 857 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 FNDC3AQ9Y2H6 1198 aaKnown RBP13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 CEP192Q8TEP8 1941 aa13.13□□□□□ -0.31
CYFIP1-210ENST00000619290 HELZP42694 1942 aaKnown RBP13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 TISP43B9A030 160 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 J3QKU1 62 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 TRIM24O15164 1050 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 FLRT2O43155 660 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 ITGB3P05106 788 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 MBL2P11226 248 aaPredicted RBP13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 SCP2P22307 547 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 PCSK1P29120 753 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 GRIK1P39086 918 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 MATKP42679 507 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 HLA-BQ31612 363 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 EGFLAMQ63HQ2 1017 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 IL27RAQ6UWB1 636 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 DTHD1Q6ZMT9 781 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 C4orf50Q6ZRC1 276 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 DDX42Q86XP3 938 aaKnown RBP eCLIP13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 CHPFQ8IZ52 775 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 TERB1Q8NA31 727 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 REEP2Q9BRK0 252 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 AGO2Q9UKV8 859 aaKnown RBP13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 PCDHB6Q9Y5E3 794 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 RAD54BQ9Y620 910 aa13.12□□□□□ -0.31
CYFIP1-210ENST00000619290 TCHHQ07283 1943 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 ANAPC1Q9H1A4 1944 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 HECTD1Q9ULT8 2610 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 CAPN9O14815 690 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 ATP2C2O75185 946 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 OAS1P00973 400 aaKnown RBP13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 HLA-EP13747 358 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 BDNFP23560 247 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 ANXA13P27216 316 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 CD6P30203 668 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 PPP3CCP48454 512 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 LHX1P48742 406 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 TFAMQ00059 246 aaKnown RBP13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 BNC1Q01954 994 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 SMAD1Q15797 465 aaKnown RBP13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 ANO4Q32M45 955 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 CCDC157Q569K6 752 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 HYIQ5T013 277 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 FAM171BQ6P995 826 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 VSTM1Q6UX27 236 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 KIAA1324Q6UXG2 1013 aaKnown RBP13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 LRRC69Q6ZNQ3 347 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 NT5DC4Q86YG4 428 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 ADGRF2Q8IZF7 708 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 DNASE2BQ8WZ79 361 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 MYLPFQ96A32 169 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 MRGPRX1Q96LB2 322 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 FCRL3Q96P31 734 aaPredicted RBP13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 TTLL2Q9BWV7 592 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 ODF2LQ9ULJ1 636 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 BTBD3Q9Y2F9 522 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 STARD13Q9Y3M8 1113 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 SNX9Q9Y5X1 595 aa13.11□□□□□ -0.31
CYFIP1-210ENST00000619290 E2F8A0AVK6 867 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 PLK4O00444 970 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 LAD1O00515 517 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 GABRDO14764 452 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 HOXC11O43248 304 aaPredicted RBP13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 TRAK2O60296 914 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 FAM13AO94988 1023 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 IL18RAPO95256 599 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 NCAM1P13591 858 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 PLCG1P19174 1290 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 TOB1P50616 345 aaPredicted RBP13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 PSMC1P62191 440 aaKnown RBP13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 POU5F1Q01860 360 aaKnown RBP13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 SCARA3Q6AZY7 606 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 SLFN12LQ6IEE8 588 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 KCTD17Q8N5Z5 321 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 TOP6BLQ8N6T0 577 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 C1orf127Q8N9H9 656 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 OTUB2Q96DC9 234 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 TOE1Q96GM8 510 aaKnown RBP13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 CDK5RAP3Q96JB5 506 aa13.1□□□□□ -0.31
CYFIP1-210ENST00000619290 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms