RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 NFE2Q16621 373 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 SPATA2LQ8IUW3 424 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 KATNAL2Q8IYT4 538 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 EXD1Q8NHP7 514 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 TMEM51Q9NW97 253 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 FEZ2Q9UHY8 353 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 RASAL2Q9UJF2 1139 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 TCRBV5S1A1TA0A578 114 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 OR6C75A6NL08 312 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 TBKBP1A7MCY6 615 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 AP1G2O75843 785 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 GLI1P08151 1106 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 RHOXF2BP0C7M4 288 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 LINC00271P0C7V0 271 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 PDGFRAP16234 1089 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 ACAT1P24752 427 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 RFC1P35251 1148 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 BRCC3P46736 316 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 RGS7P49802 495 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 PEX5P50542 639 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 ZNF143P52747 638 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 PAN2Q504Q3 1202 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 FAM183BPQ6ZVS7 135 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 C3orf58Q8NDZ4 430 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 MS4A14Q96JA4 679 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 RHOXF2Q9BQY4 288 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 LRFN3Q9BTN0 628 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 KRT82Q9NSB4 513 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 CYTH4Q9UIA0 394 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 ADAM28Q9UKQ2 775 aa17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 TIMM13Q9Y5L4 95 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC3-210ENST00000617904 DDHD2O94830 711 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 PCK1P35558 622 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 RPL34P49207 117 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 ALDH7A1P49419 539 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 RPL7AP62424 266 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 ZNF280DQ6N043 979 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 PMF1Q6P1K2 205 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 SLC26A9Q7LBE3 791 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 FAM35AQ86V20 835 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 ZNF280BQ86YH2 543 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 MAP7D3Q8IWC1 876 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 FUKQ8N0W3 1084 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 FIBCD1Q8N539 461 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 HASPINQ8TF76 798 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 CASD1Q96PB1 797 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 PAAF1Q9BRP4 392 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 RC3H2Q9HBD1 1191 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 PNPLA8Q9NP80 782 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 STK39Q9UEW8 545 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 STAP1Q9ULZ2 295 aa17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 PRG3Q9Y2Y8 225 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC3-210ENST00000617904 PDE2AO00408 941 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 DPYSL4O14531 572 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 NRP1O14786 923 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 PRPSAP2O60256 369 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 HSF2BPO75031 334 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 KRT1P04264 644 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 LCP1P13796 627 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 IL9P15248 144 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 CHRNA3P32297 505 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 RNASE9P60153 205 aaKnown RBP17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 COL19A1Q14993 1142 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 TCEAL5Q5H9L2 206 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 SPOUT1Q5T280 376 aaKnown RBP17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 TMCO3Q6UWJ1 677 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 IFT20Q8IY31 132 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 ANKRD7Q92527 254 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 NRDE2Q9H7Z3 1164 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 DMAP1Q9NPF5 467 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 C11orf16Q9NQ32 467 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 CNGB3Q9NQW8 809 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 RRN3Q9NYV6 651 aa17.57■□□□□ 0.4
TRAPPC3-210ENST00000617904 TTC3P53804 2025 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 CCDC151A5D8V7 595 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 GRXCR2A6NFK2 248 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 C5orf67F2Z3F1 127 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 PI4K2BG5E9Z4 385 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 ATP2C2O75185 946 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 TJP3O95049 919 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 OAZ2O95190 189 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 BMPR1AP36894 532 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 MAP3K7CLP57077 242 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 DHX34Q14147 1143 aaKnown RBP17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 TMEM31Q5JXX7 168 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 PTCRAQ6ISU1 281 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 WDR93Q6P2C0 686 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 FAM171BQ6P995 826 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 OLFML1Q6UWY5 402 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 ANKS3Q6ZW76 656 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 PIGZQ86VD9 579 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 SLC13A5Q86YT5 568 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 SCUBE3Q8IX30 993 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 GRK7Q8WTQ7 553 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 RXFP2Q8WXD0 754 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 ALG3Q92685 438 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 KRT35Q92764 455 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 MYLPFQ96A32 169 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 ZNF689Q96CS4 500 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms