RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 KIF2BQ8N4N8 673 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 ZCCHC9Q8N567 271 aaKnown RBP13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 SHCBP1Q8NEM2 672 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 STAMBPL1Q96FJ0 436 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 VPS39Q96JC1 886 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 TRIM62Q9BVG3 475 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 KRT82Q9NSB4 513 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 E2F8A0AVK6 867 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 C3orf70A6NLC5 250 aaPredicted RBP13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 APOC4-APOC2K7ER74 178 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 PMM2O15305 246 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 ZWINTO95229 277 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 VNN1O95497 513 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 APOC2P02655 101 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 TKTL1P51854 596 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 ADIGQ0VDE8 80 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 ERMARDQ5T6L9 678 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 RAET1EQ8TD07 263 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 WDCPQ9H6R7 721 aa13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 XAB2Q9HCS7 855 aaKnown RBP13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 DDX43Q9NXZ2 648 aaKnown RBP13.71□□□□□ -0.22
PPP4R3B-206ENST00000616407 TRAPPC3O43617 180 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 APOEP02649 317 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 PAMP19021 973 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 HOXD10P28358 340 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 OR1G1P47890 313 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 OVGP1Q12889 678 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 RAB3IL1Q8TBN0 382 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 NRCAMQ92823 1304 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 ARIH2O95376 493 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 NUDT17P0C025 328 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 PMLP29590 882 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 HADHBP55084 474 aaKnown RBP13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 ACAP1Q15027 740 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 C1orf127Q8N9H9 656 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 OR6P1Q8NGX9 317 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 TBCBQ99426 244 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 SPON2Q9BUD6 331 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 C2CD2Q9Y426 696 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 hCG_1818297A0A087WSY0 165 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 GPR182O15218 404 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 TTC39BQ5VTQ0 682 aaPredicted RBP13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 NPNTQ6UXI9 565 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 C4orf22Q6V702 233 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 FAM183BPQ6ZVS7 135 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 CCNYL1Q8N7R7 359 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 AGR3Q8TD06 166 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 CPXM1Q96SM3 734 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 SYT17Q9BSW7 474 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 CEP41Q9BYV8 373 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 SLC24A2Q9UI40 661 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 PHTF1Q9UMS5 762 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 TELO2Q9Y4R8 837 aa13.7□□□□□ -0.22
PPP4R3B-206ENST00000616407 BTBD19C9JJ37 291 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 DIAPH2O60879 1101 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 HMBSP08397 361 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 SMIM10L2AP0DMW4 78 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 SMIM10L2BP0DMW5 78 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 UNGP13051 313 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 AMPD1P23109 780 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 SERPINB9P50453 376 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 KPNA2P52292 529 aaKnown RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 MMRN1Q13201 1228 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 PKN2Q16513 984 aaKnown RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 DEFB106AQ8N104 65 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 PPTC7Q8NI37 304 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 LMO3Q8TAP4 145 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 ZNF669Q96BR6 464 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 HDAC11Q96DB2 347 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 SH3GL2Q99962 352 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 MAF1Q9H063 256 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 MANSC1Q9H8J5 431 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 PFDN6O15212 129 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 ZNF143P52747 638 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 YWHAZP63104 245 aaKnown RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 POU5F1BQ06416 359 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 MMEL1Q495T6 779 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 ARMC2Q8NEN0 867 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 TFAP2BQ92481 460 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 SP110Q9HB58 689 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 ABCA3Q99758 1704 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 CCDC160A6NGH7 325 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 MSCO60682 206 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 RGS20O76081 388 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 POMCP01189 267 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 CYP1A1P04798 512 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 POLBP06746 335 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 RBL1P28749 1068 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 ELF1P32519 619 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 PEX5P50542 639 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 FSCN1Q16658 493 aaKnown RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 L3MBTL3Q96JM7 780 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 MAGEB18Q96M61 343 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 DRG1Q9Y295 367 aaKnown RBP13.69□□□□□ -0.22
PPP4R3B-206ENST00000616407 MYH10P35580 1976 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms