RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CLK4Q9HAZ1 481 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 C6orf203Q9P0P8 240 aaPredicted RBP14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 STK39Q9UEW8 545 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 PCDHA1Q9Y5I3 950 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 MYH15Q9Y2K3 1946 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP17L15C9J2P7 530 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP17L13C9JLJ4 530 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP17L11C9JVI0 530 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP17L18D6R9N7 530 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP17L22D6RA61 530 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP17L17D6RBQ6 530 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP17L19D6RCP7 530 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP17L20D6RJB6 530 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 APRTP07741 180 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 THRAP10827 490 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 P4HA1P13674 534 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 LSM3P62310 102 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP17L24Q0WX57 530 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 FASTKD3Q14CZ7 662 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 CGB2Q6NT52 195 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 LLGL2Q6P1M3 1020 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 PAOXQ6QHF9 649 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 SNX32Q86XE0 403 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 MICU2Q8IYU8 434 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 USP29Q9HBJ7 922 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 SEPT10Q9P0V9 454 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 GTF3C4Q9UKN8 822 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 DGKBQ9Y6T7 804 aa14.04□□□□□ -0.16
PPP4R3B-205ENST00000616288 PRKCIP41743 596 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 CTC1Q2NKJ3 1217 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 BRDTQ58F21 947 aaPredicted RBP14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 PPM1LQ5SGD2 360 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 TMC7Q7Z402 723 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 SETD3Q86TU7 594 aaPredicted RBP14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 TRIM63Q969Q1 353 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 ANO3Q9BYT9 981 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 DNAI2Q9GZS0 605 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 TRPV5Q9NQA5 729 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 PCDHA3Q9Y5H8 950 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 TSC22D2O75157 780 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 CFBP00751 764 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 CYP2C9P11712 490 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 ALDH1B1P30837 517 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 GSSP48637 474 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 COPZ1P61923 177 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 FAM69CQ0P6D2 419 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 SMU1Q2TAY7 513 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 ZNF394Q53GI3 561 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 IQCF2Q8IXL9 164 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 POMGNT1Q8WZA1 660 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 IFT43Q96FT9 208 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 MAN1C1Q9NR34 630 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 STMN3Q9NZ72 180 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 GPRC5DQ9NZD1 345 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 RAD51BO15315 384 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 TCEA1P23193 301 aaKnown RBP14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 HIBADHP31937 336 aaKnown RBP14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 CHRNDQ07001 517 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 KIF19Q2TAC6 998 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 ARSHQ5FYA8 562 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 ZFP1Q6P2D0 407 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 BNIPLQ7Z465 357 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 CLEC4FQ8N1N0 589 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 ZCCHC9Q8N567 271 aaKnown RBP14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 PSMA8Q8TAA3 256 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 EPB41L4BQ9H329 900 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 MRPL40Q9NQ50 206 aaKnown RBP14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 RAB6BQ9NRW1 208 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 SYBUQ9NX95 663 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 CDH22Q9UJ99 828 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 TLK1Q9UKI8 766 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 KIF20BQ96Q89 1820 aa14.03□□□□□ -0.16
PPP4R3B-205ENST00000616288 HNRNPCL2B2RXH8 293 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 SNPHO15079 494 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 PRPF4O43172 522 aaKnown RBP eCLIP14.02□□□□□ -0.167e-7■□□□□ 11.2
PPP4R3B-205ENST00000616288 ITM2AO43736 263 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 ME2P23368 584 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 IL6STP40189 918 aaPredicted RBP14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 SLC12A2P55011 1212 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 GTF2IP78347 998 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 GSTO1P78417 241 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 FAXCQ5TGI0 409 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 CABLES1Q8TDN4 633 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 FNIP1Q8TF40 1166 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 PNPLA3Q9NST1 481 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 PREX1Q8TCU6 1659 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 UBXN2AP68543 259 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 NFX1Q12986 1120 aaKnown RBP14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 CCNG2Q16589 344 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 PPIL6Q8IXY8 311 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 POC5Q8NA72 575 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 FRMD8Q9BZ67 464 aaPredicted RBP14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 SUN2Q9UH99 717 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 POMPQ9Y244 141 aa14.02□□□□□ -0.16
PPP4R3B-205ENST00000616288 CEP170BQ9Y4F5 1589 aaPredicted RBP14.02□□□□□ -0.17
PPP4R3B-205ENST00000616288 TBKBP1A7MCY6 615 aa14.02□□□□□ -0.17
PPP4R3B-205ENST00000616288 USP12O75317 370 aa14.02□□□□□ -0.17
PPP4R3B-205ENST00000616288 GSNP06396 782 aa14.02□□□□□ -0.17
PPP4R3B-205ENST00000616288 CETPP11597 493 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms