RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 NDRG2Q9UN36 371 aaKnown RBP11.39□□□□□ -0.59
COL4A1-205ENST00000615732 SMG5Q9UPR3 1016 aaKnown RBP11.39□□□□□ -0.59
COL4A1-205ENST00000615732 JRKLQ9Y4A0 524 aa11.39□□□□□ -0.59
COL4A1-205ENST00000615732 TIMM13Q9Y5L4 95 aaPredicted RBP11.39□□□□□ -0.59
COL4A1-205ENST00000615732 SAR1BQ9Y6B6 198 aa11.39□□□□□ -0.59
COL4A1-205ENST00000615732 CAPN6Q9Y6Q1 641 aa11.39□□□□□ -0.59
COL4A1-205ENST00000615732 PTPRJQ12913 1337 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 EPG5Q9HCE0 2579 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 ENC1O14682 589 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 SYN3O14994 580 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 CYP26A1O43174 497 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 FAM189A1O60320 539 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 TBC1D4O60343 1298 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 LILRB5O75023 590 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 ECI2O75521 394 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 ABLIM3O94929 683 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 VNN1O95497 513 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 CLTAP09496 248 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 MYL4P12829 197 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 ATF2P15336 505 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 PTPN2P17706 415 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 MAGEA9P43362 315 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 CDR1P51861 262 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 BPIFB4P59827 614 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 NOP14P78316 857 aaKnown RBP11.38□□□□□ -0.59
COL4A1-205ENST00000615732 FZD5Q13467 585 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 CUL2Q13617 745 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 SLC10A6Q3KNW5 377 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 FAM78AQ5JUQ0 283 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 PDZD4Q76G19 769 aaPredicted RBP11.38□□□□□ -0.59
COL4A1-205ENST00000615732 TRAPPC11Q7Z392 1133 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 TCEAL8Q8IYN2 117 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 OR5B17Q8NGF7 314 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 SLC20A1Q8WUM9 679 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 CTNNBL1Q8WYA6 563 aaPredicted RBP11.38□□□□□ -0.59
COL4A1-205ENST00000615732 TSC1Q92574 1164 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 CLDN23Q96B33 292 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 FAM84AQ96KN4 292 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 SUSD3Q96L08 255 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 ZSWIM3Q96MP5 696 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 PGLYRP2Q96PD5 576 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 MTMR12Q9C0I1 747 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 EPC1Q9H2F5 836 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 ZSCAN32Q9NX65 697 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 GDE1Q9NZC3 331 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL4A1-205ENST00000615732 NENFQ9UMX5 172 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 HYOU1Q9Y4L1 999 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 PCDHB4Q9Y5E5 795 aa11.38□□□□□ -0.59
COL4A1-205ENST00000615732 V9GYY5 206 aaPredicted RBP11.38□□□□□ -0.59
COL4A1-205ENST00000615732 A0A0A6YYK5 440 aaPredicted RBP11.37□□□□□ -0.59
COL4A1-205ENST00000615732 CTAGE15A4D2H0 777 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 EFCAB8A8MWE9 144 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 H7C4K7 107 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 TADA3O75528 432 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 PALMO75781 387 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 CTAGE8P0CG41 777 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 RPS9P46781 194 aaKnown RBP11.37□□□□□ -0.59
COL4A1-205ENST00000615732 ATXN1P54253 815 aaKnown RBP11.37□□□□□ -0.59
COL4A1-205ENST00000615732 YWHAEP62258 255 aaKnown RBP11.37□□□□□ -0.59
COL4A1-205ENST00000615732 AMPD2Q01433 879 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
COL4A1-205ENST00000615732 ELF2Q15723 593 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 TEX35Q5T0J7 233 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 PAPD7Q5XG87 772 aaKnown RBP11.37□□□□□ -0.59
COL4A1-205ENST00000615732 SPOPLQ6IQ16 392 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 RNF19BQ6ZMZ0 732 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 CTAGE6Q86UF2 777 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 CTAGE4Q8IX94 777 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 ELMOD1Q8N336 334 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 SLC30A5Q8TAD4 765 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 EPS8L1Q8TE68 723 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 TAF4BQ92750 862 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 ELSPBP1Q96BH3 223 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 ASB16Q96NS5 453 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 SYT11Q9BT88 431 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 PDCL3Q9H2J4 239 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 SLITRK6Q9H5Y7 841 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 BRD9Q9H8M2 597 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 AVENQ9NQS1 362 aaPredicted RBP11.37□□□□□ -0.59
COL4A1-205ENST00000615732 PCDHB8Q9UN66 801 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 YIPF1Q9Y548 306 aa11.37□□□□□ -0.59
COL4A1-205ENST00000615732 ANKRD62A6NC57 917 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 PPEF2O14830 753 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 MOSPD3O75425 235 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 KRT37O76014 449 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 VNN2O95498 520 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 TDGF1P13385 188 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 CYP11B1P15538 503 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 TCP1P17987 556 aaKnown RBP11.36□□□□□ -0.59
COL4A1-205ENST00000615732 ABCB4P21439 1286 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 TGM1P22735 817 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 GDI1P31150 447 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
COL4A1-205ENST00000615732 VIPR2P41587 438 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 GALCP54803 685 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 CDR2Q01850 454 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms