RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 TUBP50607 506 aa26.73■■□□□ 1.87
SURF1-205ENST00000615505 SLC7A9P82251 487 aa26.73■■□□□ 1.87
SURF1-205ENST00000615505 BST2Q10589 180 aaKnown RBP26.73■■□□□ 1.87
SURF1-205ENST00000615505 LCLAT1Q6UWP7 414 aa26.73■■□□□ 1.87
SURF1-205ENST00000615505 PIGZQ86VD9 579 aa26.73■■□□□ 1.87
SURF1-205ENST00000615505 TTC30AQ86WT1 665 aa26.73■■□□□ 1.87
SURF1-205ENST00000615505 TTC16Q8NEE8 873 aa26.73■■□□□ 1.87
SURF1-205ENST00000615505 ZFYVE19Q96K21 471 aa26.73■■□□□ 1.87
SURF1-205ENST00000615505 RNF38Q9H0F5 515 aa26.73■■□□□ 1.87
SURF1-205ENST00000615505 GKN1Q9NS71 199 aa26.73■■□□□ 1.87
SURF1-205ENST00000615505 KANSL1LA0AUZ9 987 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 MAN2B1O00754 1011 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 OLFM2O95897 454 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 ZNF132P52740 706 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 MLLT6P55198 1093 aaPredicted RBP26.72■■□□□ 1.87
SURF1-205ENST00000615505 MTF1Q14872 753 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 CNGA2Q16280 664 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 ZNF852Q6ZMS4 543 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 ANKRD20A12PQ8NF67 263 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 SH3RF2Q8TEC5 729 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 TFAP2BQ92481 460 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 NELL2Q99435 816 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 DDX23Q9BUQ8 820 aaKnown RBP26.72■■□□□ 1.87
SURF1-205ENST00000615505 TAB2Q9NYJ8 693 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 MRPS17Q9Y2R5 130 aaKnown RBP26.72■■□□□ 1.87
SURF1-205ENST00000615505 SIT1Q9Y3P8 196 aa26.72■■□□□ 1.87
SURF1-205ENST00000615505 XPO1O14980 1071 aaKnown RBP26.71■■□□□ 1.87
SURF1-205ENST00000615505 SETSIPP0DME0 302 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 MBL2P11226 248 aaPredicted RBP26.71■■□□□ 1.87
SURF1-205ENST00000615505 KPNA1P52294 538 aaPredicted RBP26.71■■□□□ 1.87
SURF1-205ENST00000615505 PDE4CQ08493 712 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 USP4Q13107 963 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 ZNF77Q15935 545 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 ARHGAP44Q17R89 818 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 SMYD5Q6GMV2 418 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 GJB7Q6PEY0 223 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 CCDC186Q7Z3E2 898 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 TMEM105Q8N8V8 129 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 UBA3Q8TBC4 463 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 NACA2Q9H009 215 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 C8orf33Q9H7E9 229 aaPredicted RBP26.71■■□□□ 1.87
SURF1-205ENST00000615505 USP3Q9Y6I4 520 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 PIAS3Q9Y6X2 628 aa26.71■■□□□ 1.87
SURF1-205ENST00000615505 CYP26A1O43174 497 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 PI15O43692 258 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 BRD2P25440 801 aaKnown RBP26.7■■□□□ 1.86
SURF1-205ENST00000615505 PSEN1P49768 467 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 NUBP1P53384 320 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 APBA1Q02410 837 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 PDGFRLQ15198 375 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 KRT31Q15323 416 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 RAB41Q5JT25 222 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 DDX42Q86XP3 938 aaKnown RBP eCLIP26.7■■□□□ 1.86
SURF1-205ENST00000615505 MSANTD3Q96H12 275 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 PRRX2Q99811 253 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 FAM83CQ9BQN1 747 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 KCNH6Q9H252 994 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 VPS16Q9H269 839 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 CCSER2Q9H7U1 834 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 GTSE1Q9NYZ3 720 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.7■■□□□ 1.86
SURF1-205ENST00000615505 CPQQ9Y646 472 aa26.7■■□□□ 1.86
SURF1-205ENST00000615505 PATJQ8NI35 1801 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 LEFTY2O00292 366 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 COCHO43405 550 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 CDK11BP21127 795 aaKnown RBP26.69■■□□□ 1.86
SURF1-205ENST00000615505 CD72P21854 359 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 UBXN2BQ14CS0 331 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 ITPRIPL2Q3MIP1 535 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 ANO6Q4KMQ2 910 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 C1orf228Q6PIY5 440 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 PJA1Q8NG27 643 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 RIN3Q8TB24 985 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 FOXQ1Q9C009 403 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 LRRC4Q9HBW1 653 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 SIX2Q9NPC8 291 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 DUS2Q9NX74 493 aaKnown RBP26.69■■□□□ 1.86
SURF1-205ENST00000615505 SMPD4Q9NXE4 827 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 DNAJC12Q9UKB3 198 aa26.69■■□□□ 1.86
SURF1-205ENST00000615505 MED7O43513 233 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 TLR5O60602 858 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 USP8P40818 1118 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 PLA2G4AP47712 749 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 IFNAR2P48551 515 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 TKTL1P51854 596 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 TNK2Q07912 1038 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 PKDCCQ504Y2 493 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 ARHGAP18Q8N392 663 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 KIAA1958Q8N8K9 716 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 OSCP1Q8WVF1 389 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 SHC3Q92529 594 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 OSBPL6Q9BZF3 934 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 LTB4R2Q9NPC1 389 aa26.68■■□□□ 1.86
SURF1-205ENST00000615505 ZNF318Q5VUA4 2279 aa26.67■■□□□ 1.86
SURF1-205ENST00000615505 A0A1W2PQH9 124 aa26.67■■□□□ 1.86
SURF1-205ENST00000615505 FAM170BA6NMN3 283 aa26.67■■□□□ 1.86
SURF1-205ENST00000615505 M0QYV0 167 aa26.67■■□□□ 1.86
SURF1-205ENST00000615505 TULP2O00295 520 aa26.67■■□□□ 1.86
SURF1-205ENST00000615505 PGFP49763 221 aa26.67■■□□□ 1.86
SURF1-205ENST00000615505 ZXDBP98169 803 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms