RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 OTOP2Q7RTS6 562 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 HELQQ8TDG4 1101 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 SLC26A7Q8TE54 656 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.95□□□□□ -1.785e-6■■■■□ 23.5
LTN1-207ENST00000614971 SYT15Q9BQS2 421 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 GPR63Q9BZJ6 419 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 TM6SF2Q9BZW4 377 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 TXNRD2Q9NNW7 524 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 PACSIN3Q9UKS6 424 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 BAG5Q9UL15 447 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 SH3BP1Q9Y3L3 701 aa3.95□□□□□ -1.78
LTN1-207ENST00000614971 TCRBV7S2A1N4TA0A589 114 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 RRN3P2A6NIE6 340 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 ERI2A8K979 691 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 HMGCRP04035 888 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 RBBP7Q16576 425 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 IMPG1Q17R60 797 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 ABRAQ8N0Z2 381 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 LNX1Q8TBB1 728 aaPredicted RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 CCHCR1Q8TD31 782 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 TNFRSF25Q93038 417 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 PBXIP1Q96AQ6 731 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 PHF21BQ96EK2 531 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 ULBP1Q9BZM6 244 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 CASS4Q9NQ75 786 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 TMEM39AQ9NV64 488 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 KPNA7A9QM74 516 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 ACKR2O00590 384 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 MAPK13O15264 365 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 CTIFO43310 598 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 HCRTO43612 131 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 IL18RAPO95256 599 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 SMIM10L2AP0DMW4 78 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 SMIM10L2BP0DMW5 78 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 RPL17P18621 184 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 TSPAN8P19075 237 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 RPL21P46778 160 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 IRAK1P51617 712 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 SEMG2Q02383 582 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 DHX34Q14147 1143 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 BTG3Q14201 252 aaPredicted RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 TAF5Q15542 800 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 TFDP3Q5H9I0 405 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 RASIP1Q5U651 963 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.94□□□□□ -1.78
LTN1-207ENST00000614971 CDKL3Q8IVW4 592 aaPredicted RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 LMNTD2Q8IXW0 634 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 SENP8Q96LD8 212 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 CAMKK2Q96RR4 588 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 MYOCQ99972 504 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 C12orf65Q9H3J6 166 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 DDX56Q9NY93 547 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 VAV3Q9UKW4 847 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 AURKCQ9UQB9 309 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 TRAF3IP3Q9Y228 551 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 CNOT1A5YKK6 2376 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 COL1A1P02452 1464 aaPredicted RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 A0A1W2PQJ5 194 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 DCDC2CA8MYV0 355 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 CXCL11O14625 94 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 ZNF263O14978 683 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 TARSP26639 723 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 PTPN7P35236 360 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 MDH1P40925 334 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 CUL3Q13618 768 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 SLFN11Q7Z7L1 901 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 DNERQ8NFT8 737 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 EIF2AQ9BY44 585 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 SFMBT1Q9UHJ3 866 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 SLC8A2Q9UPR5 921 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 TAF1P21675 1872 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 NALCNQ8IZF0 1738 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 ARHGEF37A1IGU5 675 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 FAM187AA6NFU0 413 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 MSI1O43347 362 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 GARTP22102 1010 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 CYP2F1P24903 491 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 RFX3P48380 749 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 HARS2P49590 506 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 SP2Q02086 613 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 CHI3L2Q15782 390 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 NBPF20Q3BBV1 942 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 FBXO48Q5FWF7 155 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 RD3Q7Z3Z2 195 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 CFAP52Q8N1V2 620 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 CARD9Q9H257 536 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 ECT2Q9H8V3 914 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 VPS28Q9UK41 221 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 ST3GAL5Q9UNP4 418 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 REXO2Q9Y3B8 237 aaKnown RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 MORC2Q9Y6X9 1032 aaPredicted RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 MYH13Q9UKX3 1938 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 C9IYK1 514 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 SCAMP1O15126 338 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 GSTA4O15217 222 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 GPR182O15218 404 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 AOC2O75106 756 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 NDUFS3O75489 264 aa3.94□□□□□ -1.78
LTN1-207ENST00000614971 FARP2O94887 1054 aaPredicted RBP3.94□□□□□ -1.78
LTN1-207ENST00000614971 SHBGP04278 402 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms