RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 LENG8Q96PV6 779 aaPredicted RBP6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 PRR25Q96S07 402 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 INO80BQ9C086 356 aaPredicted RBP6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 ZCWPW1Q9H0M4 648 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 ADARB2Q9NS39 739 aaKnown RBP6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 SH3BP4Q9P0V3 963 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 CORO2BQ9UQ03 480 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 FRMD4BQ9Y2L6 1034 aa6.07□□□□□ -1.44
SCAMP1-205ENST00000614488 H7C1Q1 480 aa6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 A1BGP04217 495 aa6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 MYCLP12524 364 aaPredicted RBP6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 SLC5A1P13866 664 aa6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 SUMO2P61956 95 aaKnown RBP6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 HOXA4Q00056 320 aaPredicted RBP6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 TFF2Q03403 129 aa6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 PLAG1Q6DJT9 500 aa6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 TRIM72Q6ZMU5 477 aa6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 DPY19L3Q6ZPD9 716 aa6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 SIRT6Q8N6T7 355 aa6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 IQCDQ96DY2 449 aa6.06□□□□□ -1.44
SCAMP1-205ENST00000614488 MANSC4A6NHS7 340 aaPredicted RBP6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 PMPCBO75439 489 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 PARP1P09874 1014 aaKnown RBP6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 ZNF37AP17032 561 aaPredicted RBP6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 GNALP38405 381 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 PIK3CBP42338 1070 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 CASP5P51878 434 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 PGDP52209 483 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 ITGA8P53708 1063 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 ZNF543Q08ER8 600 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 PROSER3Q2NL68 480 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 COBLL1Q53SF7 1204 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 KIRREL2Q6UWL6 708 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 NAPRTQ6XQN6 538 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 RNF44Q7L0R7 432 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 SFTPA1Q8IWL2 248 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 DPF1Q92782 380 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 DAZAP1Q96EP5 407 aaKnown RBP6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 ZDHHC12Q96GR4 267 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 SNX18Q96RF0 628 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 AMFRQ9UKV5 643 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 FAM50BQ9Y247 325 aa6.05□□□□□ -1.44
SCAMP1-205ENST00000614488 CLCA1A8K7I4 914 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 AP4M1O00189 453 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 THAP12O43422 761 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 HGFP14210 728 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 GATMP50440 423 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 IFIT5Q13325 482 aaKnown RBP6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 L1TD1Q5T7N2 865 aaKnown RBP6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 KIAA1614Q5VZ46 1190 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 C11orf96Q7Z7L8 435 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 CCAR1Q8IX12 1150 aaKnown RBP6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 TERB1Q8NA31 727 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 PJA1Q8NG27 643 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 CYP2W1Q8TAV3 490 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 COLEC11Q9BWP8 271 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 FLRT1Q9NZU1 646 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 DNAJB11Q9UBS4 358 aa6.04□□□□□ -1.44
SCAMP1-205ENST00000614488 ANO9A1A5B4 782 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 PMM2O15305 246 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 TSHRP16473 764 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 FOXF2Q12947 444 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 STK3Q13188 491 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 DENND2CQ68D51 928 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 PTCHD4Q6ZW05 846 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 KRT28Q7Z3Y7 464 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 SRRM1Q8IYB3 904 aaKnown RBP6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 RNF152Q8N8N0 203 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 ATP11CQ8NB49 1132 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 CTHRC1Q96CG8 243 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 ZBTB45Q96K62 511 aaPredicted RBP6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 MACROD1Q9BQ69 325 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 SELENOOQ9BVL4 669 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 CIPCQ9C0C6 399 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 VPS51Q9UID3 782 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 RIMKLBQ9ULI2 386 aa6.03□□□□□ -1.44
SCAMP1-205ENST00000614488 POM121BA6NF01 834 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 CES2O00748 559 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 APAF1O14727 1248 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 KPNA5O15131 536 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 CAND2O75155 1236 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 PDE8BO95263 885 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 FGAP02671 866 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 CD19P15391 556 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 FPR3P25089 353 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 TUBA4AP68366 448 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 PSG6Q00889 435 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 CLCA4Q14CN2 919 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 RNASE12Q5GAN4 147 aaKnown RBP6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 MANEALQ5VSG8 457 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 PRAMEF17Q5VTA0 474 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 VGLL2Q8N8G2 317 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 FAM227BQ96M60 508 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 SEMA4CQ9C0C4 833 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 HEYLQ9NQ87 328 aaPredicted RBP6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 SNX15Q9NRS6 342 aa6.02□□□□□ -1.45
SCAMP1-205ENST00000614488 A0A1W2PPC4 97 aa6.01□□□□□ -1.45
SCAMP1-205ENST00000614488 CGB1A6NKQ9 187 aa6.01□□□□□ -1.45
SCAMP1-205ENST00000614488 A8MVJ9 347 aa6.01□□□□□ -1.45
SCAMP1-205ENST00000614488 TISP43B9A030 160 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms