RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SLC38A7Q9NVC3 462 aa11.3□□□□□ -0.6
FAM3A-221ENST00000612856 VAV3Q9UKW4 847 aa11.3□□□□□ -0.6
FAM3A-221ENST00000612856 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
FAM3A-221ENST00000612856 F8VZ95 297 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 LINGO3P0C6S8 592 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 RRM1P23921 792 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 CDC42EP1Q00587 391 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 DYNC1I2Q13409 638 aaKnown RBP11.29□□□□□ -0.6
FAM3A-221ENST00000612856 PDZD4Q76G19 769 aaPredicted RBP11.29□□□□□ -0.6
FAM3A-221ENST00000612856 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 DDX53Q86TM3 631 aaKnown RBP11.29□□□□□ -0.6
FAM3A-221ENST00000612856 FBXO25Q8TCJ0 367 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 EXT2Q93063 718 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 PTPN18Q99952 460 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 GORASP1Q9BQQ3 440 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 CEP41Q9BYV8 373 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 SEMA4AQ9H3S1 761 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 OSGEPQ9NPF4 335 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 FIS1Q9Y3D6 152 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 TRPV2Q9Y5S1 764 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 ATP8B3O60423 1300 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 ATXN2Q99700 1313 aaKnown RBP11.29□□□□□ -0.6
FAM3A-221ENST00000612856 BRWD3Q6RI45 1802 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 MAP3K7O43318 606 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 LRG1P02750 347 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 CCDC130P13994 396 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 RECQLP46063 649 aaPredicted RBP11.29□□□□□ -0.6
FAM3A-221ENST00000612856 TMED2Q15363 201 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 SV2CQ496J9 727 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 ERMARDQ5T6L9 678 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 STKLD1Q8NE28 680 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 SLC2A14Q8TDB8 520 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 HIC2Q96JB3 615 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 PBKQ96KB5 322 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 EIF2AQ9BY44 585 aaKnown RBP11.29□□□□□ -0.6
FAM3A-221ENST00000612856 SARS2Q9NP81 518 aaKnown RBP11.29□□□□□ -0.6
FAM3A-221ENST00000612856 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 LMCD1Q9NZU5 365 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 PCDHGC5Q9Y5F6 944 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 CNTNAP2Q9UHC6 1331 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 IGLV3-22A0A075B6J6 115 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 CFAP69A5D8W1 941 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 EIF3DO15371 548 aaKnown RBP eCLIP11.29□□□□□ -0.6
FAM3A-221ENST00000612856 PRLRP16471 622 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 PCSK7Q16549 785 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 PID1Q7Z2X4 250 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 CHSY1Q86X52 802 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 TEX9Q8N6V9 391 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 TTC8Q8TAM2 541 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 MAGEC3Q8TD91 643 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 SLC35C1Q96A29 364 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 TIPINQ9BVW5 301 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 COLEC11Q9BWP8 271 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 SMYD3Q9H7B4 428 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 EBF2Q9HAK2 575 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 SIK3Q9Y2K2 1263 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 SCN9AQ15858 1988 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 KIAA1551Q9HCM1 1747 aa11.29□□□□□ -0.6
FAM3A-221ENST00000612856 A0A0G2JND7 137 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 M0QYT0 321 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 CLDN5O00501 218 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 ATP9BO43861 1147 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 APOEP02649 317 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 PYGBP11216 843 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 CACNA2D1P54289 1103 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 CDK17Q00537 523 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 YAF2Q8IY57 180 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 CCDC110Q8TBZ0 833 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 IQCDQ96DY2 449 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 CFAP36Q96G28 342 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 SLITRK1Q96PX8 696 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
FAM3A-221ENST00000612856 C17orf75Q9HAS0 396 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 GGA2Q9UJY4 613 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 EP300Q09472 2414 aaPredicted RBP11.28□□□□□ -0.6
FAM3A-221ENST00000612856 ZDBF2Q9HCK1 2354 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 AHCTF1Q8WYP5 2266 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 KRT10P13645 584 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 EPHB2P29323 1055 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 NOVP48745 357 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 PDE1BQ01064 536 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 DNAJC3Q13217 504 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 CLUL1Q15846 466 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 MEA1Q16626 185 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 IL31Q6EBC2 164 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 FBXO32Q969P5 355 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
FAM3A-221ENST00000612856 TLL1O43897 1013 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 TSPAN3O60637 253 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 DUSP11O75319 330 aaKnown RBP11.28□□□□□ -0.6
FAM3A-221ENST00000612856 GSTA1P08263 222 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 CTNNB1P35222 781 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 SPIRE1Q08AE8 756 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 RCN1Q15293 331 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 ANO4Q32M45 955 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 PHLDB3Q6NSJ2 640 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 TMC3Q7Z5M5 1100 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 SPATA24Q86W54 205 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 CCNJLQ8IV13 435 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms