RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 KIF11P52732 1056 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 APBA1Q02410 837 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 TYRO3Q06418 890 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 TCP11X2Q5H9J9 407 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 CDKAL1Q5VV42 579 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 GJB7Q6PEY0 223 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 ENOSF1Q7L5Y1 443 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 PIGZQ86VD9 579 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 TTC16Q8NEE8 873 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 SH3RF2Q8TEC5 729 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 UBE2TQ9NPD8 197 aaPredicted RBP19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 HESX1Q9UBX0 185 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 SCML2Q9UQR0 700 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 CPQQ9Y646 472 aa19.07■□□□□ 0.64
SEMA3B-211ENST00000612509 RNF225M0QZC1 329 aaPredicted RBP19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 COCHO43405 550 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 MBL2P11226 248 aaPredicted RBP19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 CD72P21854 359 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 BRD2P25440 801 aaKnown RBP19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 PON1P27169 355 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 SLC8A3P57103 927 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 TNK2Q07912 1038 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 BST2Q10589 180 aaKnown RBP19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 UBXN2BQ14CS0 331 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 HECTD3Q5T447 861 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 CC2D1AQ6P1N0 951 aaPredicted RBP19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 CCDC105Q8IYK2 499 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 TFAP2BQ92481 460 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 MSANTD3Q96H12 275 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 FAM81BQ96LP2 452 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 FAM83CQ9BQN1 747 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 ZSWIM1Q9BR11 485 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 RNF38Q9H0F5 515 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 KCNH6Q9H252 994 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 CCSER2Q9H7U1 834 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 HPS4Q9NQG7 708 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 TLR8Q9NR97 1041 aaKnown RBP19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 SMPD4Q9NXE4 827 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 TAB2Q9NYJ8 693 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 GTSE1Q9NYZ3 720 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 CHORDC1Q9UHD1 332 aaPredicted RBP19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 KIAA1257Q9ULG3 409 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 CNTN6Q9UQ52 1028 aa19.06■□□□□ 0.64
SEMA3B-211ENST00000612509 LEFTY2O00292 366 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 TULP2O00295 520 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 XPO1O14980 1071 aaKnown RBP19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 CALCAP01258 141 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 SETSIPP0DME0 302 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 KRT5P13647 590 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 TARSP26639 723 aaKnown RBP19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 SOX9P48436 509 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 PGFP49763 221 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 NUBP1P53384 320 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 MFAP3P55082 362 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 ZXDBP98169 803 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 MYL5Q02045 173 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 PDE4CQ08493 712 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 STILQ15468 1287 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 RAB41Q5JT25 222 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 TRIM68Q6AZZ1 485 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 LCLAT1Q6UWP7 414 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 ZNF852Q6ZMS4 543 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 CCDC186Q7Z3E2 898 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 PRSS33Q8NF86 280 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 OSCP1Q8WVF1 389 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 UBXN6Q9BZV1 441 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 SIX2Q9NPC8 291 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 GKN1Q9NS71 199 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 SIT1Q9Y3P8 196 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 USP3Q9Y6I4 520 aa19.05■□□□□ 0.64
SEMA3B-211ENST00000612509 F5P12259 2224 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 M0QYV0 167 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 PES1O00541 588 aaKnown RBP19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 MAN2B1O00754 1011 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 TLR5O60602 858 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 DCNP07585 359 aaKnown RBP19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 GLULP15104 373 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 ARSAP15289 507 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 CTHP32929 405 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 PLA2G4AP47712 749 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 IFNAR2P48551 515 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 KPNA1P52294 538 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 MLLT6P55198 1093 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 PDGFRLQ15198 375 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 PKDCCQ504Y2 493 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 TTC8Q8TAM2 541 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 FAM3CQ92520 227 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 ZFRQ96KR1 1074 aaKnown RBP19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 PRRX2Q99811 253 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 OSBPL6Q9BZF3 934 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 EBF3Q9H4W6 596 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 C8orf33Q9H7E9 229 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 NMUR1Q9HB89 426 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 CYLDQ9NQC7 956 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 OSER1Q9NX31 292 aa19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 AJAP1Q9UKB5 411 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 MRPS17Q9Y2R5 130 aaKnown RBP19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 MTF2Q9Y483 593 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-211ENST00000612509 ARIH1Q9Y4X5 557 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms