RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CORO7P57737 925 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 PDIA2Q13087 525 aaKnown RBP14.23□□□□□ -0.13
NEK3-205ENST00000610828 TFDP2Q14188 446 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 BOLA3Q53S33 107 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 ZC3H12AQ5D1E8 599 aaKnown RBP14.23□□□□□ -0.13
NEK3-205ENST00000610828 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 PPIL6Q8IXY8 311 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 CYP4X1Q8N118 509 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 ANKRD52Q8NB46 1076 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 STK32AQ8WU08 396 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 CPT1BQ92523 772 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 VPS37BQ9H9H4 285 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 GDAP2Q9NXN4 497 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 NAALADL1Q9UQQ1 740 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
NEK3-205ENST00000610828 TMEM120BA0PK00 339 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 DPYSL4O14531 572 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 HUS1O60921 280 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 BANF1O75531 89 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 AKR1A1P14550 325 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 RDXP35241 583 aaKnown RBP14.23□□□□□ -0.13
NEK3-205ENST00000610828 NRLP54845 237 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 HIF1AQ16665 826 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 SV2CQ496J9 727 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 XKR4Q5GH76 650 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 ANKRD22Q5VYY1 191 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 DARS2Q6PI48 645 aaKnown RBP14.23□□□□□ -0.13
NEK3-205ENST00000610828 C1orf228Q6PIY5 440 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 MICALCLQ6ZW33 695 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 FAM228AQ86W67 206 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 SPATS2Q86XZ4 545 aaKnown RBP14.23□□□□□ -0.13
NEK3-205ENST00000610828 ZDHHC17Q8IUH5 632 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 CRYBG2Q8N1P7 616 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 MGARPQ8TDB4 240 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 SLC2A14Q8TDB8 520 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 ZFP42Q96MM3 310 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 KCNK9Q9NPC2 374 aa14.23□□□□□ -0.13
NEK3-205ENST00000610828 LILRA4P59901 499 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 ROR1Q01973 937 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 GAD2Q05329 585 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 NOMO1Q15155 1222 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 FAM47CQ5HY64 1035 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 RGMBQ6NW40 437 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 ANKMY2Q8IV38 441 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 ADGRF2Q8IZF7 708 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 DYDC1Q8WWB3 177 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 RNF157Q96PX1 679 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 SNRNP25Q9BV90 132 aaKnown RBP14.22□□□□□ -0.13
NEK3-205ENST00000610828 ZFYVE28Q9HCC9 887 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 DDX20Q9UHI6 824 aaKnown RBP14.22□□□□□ -0.13
NEK3-205ENST00000610828 LGALS13Q9UHV8 139 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 KIAA0754O94854 1291 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 TFE3P19532 575 aaPredicted RBP14.22□□□□□ -0.13
NEK3-205ENST00000610828 HOXC8P31273 242 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 HDAC4P56524 1084 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 BASP1P80723 227 aaKnown RBP14.22□□□□□ -0.13
NEK3-205ENST00000610828 ADCY1Q08828 1119 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 LRRC14Q15048 493 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 PDK2Q15119 407 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 CA9Q16790 459 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 PPP6R3Q5H9R7 873 aaPredicted RBP14.22□□□□□ -0.13
NEK3-205ENST00000610828 GNASQ5JWF2 1037 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 TAF2Q6P1X5 1199 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 SAPCD2Q86UD0 394 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 CCDC13Q8IYE1 715 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 HEY1Q9Y5J3 304 aa14.22□□□□□ -0.13
NEK3-205ENST00000610828 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 POC1B-GALNT4F8VUJ3 575 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 H7C0C1 242 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 M0QZ92 97 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 ALOX15BO15296 676 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 BRAFP15056 766 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 DRD4P21917 467 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 IL4RP24394 825 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 ATP5OP48047 213 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 CRHR2Q13324 411 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 MTM1Q13496 603 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 TMED2Q15363 201 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 VSTM1Q6UX27 236 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 SRRM1Q8IYB3 904 aaKnown RBP14.21□□□□□ -0.13
NEK3-205ENST00000610828 ANKRD42Q8N9B4 389 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 NAT8LQ8N9F0 302 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 TEKT4Q8WW24 435 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 TNIP3Q96KP6 325 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 ZNF317Q96PQ6 595 aaPredicted RBP14.21□□□□□ -0.13
NEK3-205ENST00000610828 TSPAN18Q96SJ8 248 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 TBCBQ99426 244 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 DNAI2Q9GZS0 605 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 PCDH18Q9HCL0 1135 aa14.21□□□□□ -0.13
NEK3-205ENST00000610828 TCRBV7S3A2A0A539 114 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 C5orf60A6NFR6 353 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 PTGESO14684 152 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 DUSP11O75319 330 aaKnown RBP14.2□□□□□ -0.14
NEK3-205ENST00000610828 CTGFP29279 349 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 STIP1P31948 543 aaKnown RBP14.2□□□□□ -0.14
NEK3-205ENST00000610828 ATXN1P54253 815 aaKnown RBP14.2□□□□□ -0.14
NEK3-205ENST00000610828 ARL4CP56559 192 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 IFT88Q13099 833 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 ANKRD20A8PQ5CZ79 823 aa14.2□□□□□ -0.14
NEK3-205ENST00000610828 FNBP1LQ5T0N5 605 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms