RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 ZMIZ2Q8NF64 920 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 DUSP16Q9BY84 665 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 FAM86C1Q9NVL1 165 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 SMPD4Q9NXE4 827 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 GMIPQ9P107 970 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 CHORDC1Q9UHD1 332 aaPredicted RBP14.15□□□□□ -0.14
SENP3-209ENST00000610454 CPQQ9Y646 472 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 LEFTY2O00292 366 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 OAS1P00973 400 aaKnown RBP14.14□□□□□ -0.15
SENP3-209ENST00000610454 TCF3P15923 654 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 MTIF2P46199 727 aaKnown RBP14.14□□□□□ -0.15
SENP3-209ENST00000610454 TUBP50607 506 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 SLC7A9P82251 487 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 NR1H3Q13133 447 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 TRIM68Q6AZZ1 485 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 OSCP1Q8WVF1 389 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 FAM83CQ9BQN1 747 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 DLGAP2Q9P1A6 1054 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 PCDHB4Q9Y5E5 795 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 WNT6Q9Y6F9 365 aa14.14□□□□□ -0.15
SENP3-209ENST00000610454 SLC9A3R1O14745 358 aaPredicted RBP14.13□□□□□ -0.15
SENP3-209ENST00000610454 NFATC1O95644 943 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 ARSAP15289 507 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 ERCC5P28715 1186 aaPredicted RBP14.13□□□□□ -0.15
SENP3-209ENST00000610454 BCAT1P54687 386 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 GOLGA8FQ08AF8 430 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 GOLGA8DPQ0D2H9 430 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 PPP2R5DQ14738 602 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 PON2Q15165 354 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 GOLGA7BQ2TAP0 167 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 DPCR1Q3MIW9 517 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 ARHGAP17Q68EM7 881 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 TMEM270Q6UE05 265 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 TADA2BQ86TJ2 420 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 CLDN23Q96B33 292 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 IER2Q9BTL4 223 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 RNF38Q9H0F5 515 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 INTS2Q9H0H0 1204 aaKnown RBP14.13□□□□□ -0.15
SENP3-209ENST00000610454 LMAN1LQ9HAT1 526 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 IL37Q9NZH6 218 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 KIAA1257Q9ULG3 409 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 SCML2Q9UQR0 700 aa14.13□□□□□ -0.15
SENP3-209ENST00000610454 FAM92AA1XBS5 289 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 CYP26A1O43174 497 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 COCHO43405 550 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 TLR5O60602 858 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 OLFM2O95897 454 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 MBD3O95983 291 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 PAEPP09466 180 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 VDRP11473 427 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 GCNT1Q02742 428 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 GRSF1Q12849 480 aaKnown RBP eCLIP14.12□□□□□ -0.15
SENP3-209ENST00000610454 DGKKQ5KSL6 1271 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 SNX30Q5VWJ9 437 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 ZC3H14Q6PJT7 736 aaKnown RBP14.12□□□□□ -0.15
SENP3-209ENST00000610454 RRAGAQ7L523 313 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 GPRIN1Q7Z2K8 1008 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 KIAA1958Q8N8K9 716 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 ANKRD52Q8NB46 1076 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 EHBP1Q8NDI1 1231 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 RIN3Q8TB24 985 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 FAM81BQ96LP2 452 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 THAP9Q9H5L6 903 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 CCSER2Q9H7U1 834 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 ECT2Q9H8V3 914 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 HPS4Q9NQG7 708 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 CFAP97Q9P2B7 532 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 NAGPAQ9UK23 515 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 TSPAN16Q9UKR8 245 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 SH3BP1Q9Y3L3 701 aa14.12□□□□□ -0.15
SENP3-209ENST00000610454 HHLA1C9JL84 531 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 PES1O00541 588 aaKnown RBP14.11□□□□□ -0.15
SENP3-209ENST00000610454 ZDHHC11BP0C7U3 371 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 RALAP11233 206 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 KRT5P13647 590 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 ATP5C1P36542 298 aaKnown RBP14.11□□□□□ -0.15
SENP3-209ENST00000610454 PSEN1P49768 467 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 KIF11P52732 1056 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 BST2Q10589 180 aaKnown RBP14.11□□□□□ -0.15
SENP3-209ENST00000610454 STILQ15468 1287 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 CT47A1Q5JQC4 288 aaPredicted RBP14.11□□□□□ -0.15
SENP3-209ENST00000610454 TXNDC11Q6PKC3 985 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 ARHGAP18Q8N392 663 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 CDK5RAP1Q96SZ6 601 aaKnown RBP14.11□□□□□ -0.15
SENP3-209ENST00000610454 UBXN6Q9BZV1 441 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 CHRDQ9H2X0 955 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 LRRC4Q9HBW1 653 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 TBC1D14Q9P2M4 693 aa14.11□□□□□ -0.15
SENP3-209ENST00000610454 PIEZO1Q92508 2521 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 CACNA1IQ9P0X4 2223 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 E2F8A0AVK6 867 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 SHISA7A6NL88 538 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 SETSIPP0DME0 302 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 IRF1P10914 325 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 CHRNB1P11230 501 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 RARGP13631 454 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 PRKCSHP14314 528 aaPredicted RBP14.1□□□□□ -0.15
SENP3-209ENST00000610454 CCR3P51677 355 aa14.1□□□□□ -0.15
SENP3-209ENST00000610454 MFAP3P55082 362 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms