RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 HNRNPMP52272 730 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 ICA1Q05084 483 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 ITIH3Q06033 890 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 CERCAMQ5T4B2 595 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 ERAP2Q6P179 960 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 GGT6Q6P531 493 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 USP17L6PQ6QN14 398 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 CRTC1Q6UUV9 634 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 TSHZ1Q6ZSZ6 1077 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 LNX2Q8N448 690 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 GLIS1Q8NBF1 620 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 TOR1AIP2Q8NFQ8 470 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 CYP2W1Q8TAV3 490 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 TMEM171Q8WVE6 324 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 SLC9A6Q92581 669 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 C18orf8Q96DM3 657 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 TRIM5Q9C035 493 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 RGL1Q9NZL6 768 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 CD3EAPO15446 510 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 KCNQ3O43525 872 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 PDHA1P08559 390 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 PRKAR1BP31321 381 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 ATICP31939 592 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 MPLP40238 635 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 NXPH1P58417 271 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 FOXI1Q12951 378 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 CCNIQ14094 377 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 PUM3Q15397 648 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 DEPDC1Q5TB30 811 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 MZT2AQ6P582 158 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 VWA1Q6PCB0 445 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 USP49Q70CQ1 688 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 MYCBPAPQ8TBZ2 947 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 OSCP1Q8WVF1 389 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 ATG4AQ8WYN0 398 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 CAVIN3Q969G5 261 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 Q96MF0 132 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 PCDHAC1Q9H158 963 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 PPCSQ9HAB8 311 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 KCTD5Q9NXV2 234 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 HPSEQ9Y251 543 aa5.08□□□□□ -1.6
SMCHD1-213ENST00000609587 LOC102724159A0A0B4J2E5 919 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 GOLGA6L3A6NEY3 463 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 TLR5O60602 858 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 COQ9O75208 318 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 SKAP2O75563 359 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 HGFP14210 728 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 BCAT1P54687 386 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 SP2Q02086 613 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 EIF2B5Q13144 721 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 MPP3Q13368 585 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 PWP2Q15269 919 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 ELF2Q15723 593 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 RAB30Q15771 203 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 PDCD2Q16342 344 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 FAXCQ5TGI0 409 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 MANEALQ5VSG8 457 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 ANO1Q5XXA6 986 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 CCDC174Q6PII3 467 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 KIAA0408Q6ZU52 694 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 DTX2Q86UW9 622 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 KRT73Q86Y46 540 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 ABRAQ8N0Z2 381 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 IPO4Q8TEX9 1081 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 ZNF384Q8TF68 577 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 ATRIPQ8WXE1 791 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 FKBP10Q96AY3 582 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 FBXL20Q96IG2 436 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 PGBD1Q96JS3 809 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 ZNF668Q96K58 619 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 AIFM2Q9BRQ8 373 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 ZBTB26Q9HCK0 441 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 NECTIN3Q9NQS3 549 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 ZMYND8Q9ULU4 1186 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 SNX14Q9Y5W7 946 aa5.07□□□□□ -1.6
SMCHD1-213ENST00000609587 YY2O15391 372 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 SLC16A3O15427 465 aaKnown RBP5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 PROM1O43490 865 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 PEX1O43933 1283 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 RHOP08100 348 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 TYRP1P17643 537 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 EGR1P18146 543 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 EPHA3P29320 983 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 UQCRC1P31930 480 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 BLMHQ13867 455 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 DHX8Q14562 1220 aaKnown RBP5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 ZRSR2Q15696 482 aaKnown RBP5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 TBCCQ15814 346 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 MAPKAPK3Q16644 382 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 CCDC38Q502W7 563 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 TEDDM1Q5T9Z0 273 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 ARL6IP4Q66PJ3 421 aaKnown RBP5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 RAP1GAP2Q684P5 730 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 MRNIPQ6NTE8 343 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 Q6ZNX1 250 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 CCDC28AQ8IWP9 274 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 IZUMO1Q8IYV9 350 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 ZBTB45Q96K62 511 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms