RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 RSPH1Q8WYR4 309 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 SYN2Q92777 582 aaPredicted RBP13.5□□□□□ -0.25
USP6NL-205ENST00000609104 TBX20Q9UMR3 447 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 STX7O15400 261 aaKnown RBP13.5□□□□□ -0.25
USP6NL-205ENST00000609104 ZNF862O60290 1169 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 FYNP06241 537 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 CYP19A1P11511 503 aaPredicted RBP13.5□□□□□ -0.25
USP6NL-205ENST00000609104 MAP3K4Q9Y6R4 1608 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 CUL2Q13617 745 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 TRPC4APQ8TEL6 797 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 MIEF2Q96C03 454 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 TUBGCP4Q9UGJ1 667 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.5□□□□□ -0.25
USP6NL-205ENST00000609104 CNOT3O75175 753 aaKnown RBP13.5□□□□□ -0.25
USP6NL-205ENST00000609104 ZNF177Q13360 481 aaPredicted RBP13.5□□□□□ -0.25
USP6NL-205ENST00000609104 NOTUMQ6P988 496 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 OPTNQ96CV9 577 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 MXRA8Q9BRK3 442 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 RNF181Q9P0P0 153 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 C1orf232A0A0U1RR37 186 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 CCNG1P51959 295 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 CDH18Q13634 790 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 PHKG1Q16816 387 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 CYP4Z1Q86W10 505 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 UTP6Q9NYH9 597 aaKnown RBP13.5□□□□□ -0.25
USP6NL-205ENST00000609104 ADAM30Q9UKF2 790 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 TRIM43BA6NCK2 446 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 SDR42E2A6NKP2 422 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 PEX1O43933 1283 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 DDR2Q16832 855 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 MRNIPQ6NTE8 343 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 SLITRK1Q96PX8 696 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 NIF3L1Q9GZT8 377 aa13.5□□□□□ -0.25
USP6NL-205ENST00000609104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.257e-17■■■□□ 15.7
USP6NL-205ENST00000609104 MGAT4DA6NG13 374 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 GUCA1AP43080 201 aaPredicted RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 EIF2B2P49770 351 aaKnown RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 ANXA11P50995 505 aaKnown RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 KLHL17Q6TDP4 642 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 PPP1R10Q96QC0 940 aaKnown RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 TARS2Q9BW92 718 aaKnown RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 MAP3K13O43283 966 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 C16orf72Q14CZ0 275 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 ADRM1Q16186 407 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 FAR2Q96K12 515 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 TMEM121Q9BTD3 319 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 DAPK2Q9UIK4 370 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 RFC5P40937 340 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 ATP1A4Q13733 1029 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 CYP39A1Q9NYL5 469 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 VPS9D1Q9Y2B5 631 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 CAMK2GQ13555 558 aaPredicted RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 PKN2Q16513 984 aaKnown RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 IZUMO2Q6UXV1 221 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 TALDO1P37837 337 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 C1DQ13901 141 aaKnown RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 DGKKQ5KSL6 1271 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 FHDC1Q9C0D6 1143 aaPredicted RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 DYTNA2CJ06 578 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 STIP1P31948 543 aaKnown RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 SNRPFP62306 86 aaKnown RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 TPD52L3Q96J77 140 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 VPS26AO75436 327 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 OOSP2Q86WS3 158 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 APLFQ8IW19 511 aaPredicted RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 REXO1L1PQ8IX06 675 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 C3orf20Q8ND61 904 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 E7ENQ6 273 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 CAPN1P07384 714 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 AGKQ53H12 422 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 SH3BP5LQ7L8J4 393 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 WDR36Q8NI36 951 aaKnown RBP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 CASP10Q92851 521 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 RXFP1Q9HBX9 757 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 NDUFA13Q9P0J0 144 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 TBX3O15119 743 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 FXR2P51116 673 aaKnown RBP eCLIP13.49□□□□□ -0.25
USP6NL-205ENST00000609104 GLB1LQ6UWU2 654 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 ZBTB49Q6ZSB9 765 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 RNFT2Q96EX2 444 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 TEX13BQ9BXU2 312 aa13.49□□□□□ -0.25
USP6NL-205ENST00000609104 INAQ16352 499 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 COMMD8Q9NX08 183 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 GLRA4Q5JXX5 417 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 SP8Q8IXZ3 490 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 USP18Q9UMW8 372 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 PSMB9P28065 219 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 ERVK-24P63145 666 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 HNRNPLLQ8WVV9 542 aaKnown RBP13.48□□□□□ -0.25
USP6NL-205ENST00000609104 USP13Q92995 863 aaPredicted RBP13.48□□□□□ -0.25
USP6NL-205ENST00000609104 CATSPER2Q96P56 530 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 POLG2Q9UHN1 485 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 SAMD9LQ8IVG5 1584 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 FAM20BO75063 409 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 BCL10O95999 233 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 GEMP55040 296 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 ISCA1Q9BUE6 129 aa13.48□□□□□ -0.25
USP6NL-205ENST00000609104 AGPAT3Q9NRZ7 376 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms