RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 CEP78Q5JTW2 689 aa5.33□□□□□ -1.56
HDDC2-207ENST00000608532 MTHFD1LQ6UB35 978 aa5.33□□□□□ -1.56
HDDC2-207ENST00000608532 RAB11FIP4Q86YS3 637 aa5.33□□□□□ -1.56
HDDC2-207ENST00000608532 YAF2Q8IY57 180 aa5.33□□□□□ -1.56
HDDC2-207ENST00000608532 ASB2Q96Q27 587 aa5.33□□□□□ -1.56
HDDC2-207ENST00000608532 MMS19Q96T76 1030 aa5.33□□□□□ -1.56
HDDC2-207ENST00000608532 THAP7Q9BT49 309 aaPredicted RBP5.33□□□□□ -1.56
HDDC2-207ENST00000608532 TRIM5Q9C035 493 aa5.33□□□□□ -1.56
HDDC2-207ENST00000608532 TBC1D23Q9NUY8 699 aa5.33□□□□□ -1.56
HDDC2-207ENST00000608532 PMPCBO75439 489 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 GCATO75600 419 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 FGAP02671 866 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 IL1R1P14778 569 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 CREB1P16220 341 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 YY1P25490 414 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 CARSP49589 748 aaKnown RBP5.32□□□□□ -1.56
HDDC2-207ENST00000608532 CPT1AP50416 773 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 PGDP52209 483 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 PSG6Q00889 435 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 SEMA5AQ13591 1074 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 GALEQ14376 348 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 NPY5RQ15761 445 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 CERKLQ49MI3 558 aaPredicted RBP5.32□□□□□ -1.56
HDDC2-207ENST00000608532 RNASE12Q5GAN4 147 aaKnown RBP5.32□□□□□ -1.56
HDDC2-207ENST00000608532 YTHDF3Q7Z739 585 aaKnown RBP5.32□□□□□ -1.56
HDDC2-207ENST00000608532 C11orf44Q8N8P7 122 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 RSPRY1Q96DX4 576 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 RITA1Q96K30 269 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 C5orf34Q96MH7 638 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 SNX18Q96RF0 628 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 VN1R3Q9BXE9 311 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 QTRT1Q9BXR0 403 aaKnown RBP5.32□□□□□ -1.56
HDDC2-207ENST00000608532 KRTAP17-1Q9BYP8 105 aa5.32□□□□□ -1.56
HDDC2-207ENST00000608532 INO80BQ9C086 356 aaPredicted RBP5.32□□□□□ -1.56
HDDC2-207ENST00000608532 METTL14Q9HCE5 456 aaKnown RBP5.32□□□□□ -1.56
HDDC2-207ENST00000608532 PPP6CO00743 305 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 PQBP1O60828 265 aaKnown RBP5.31□□□□□ -1.56
HDDC2-207ENST00000608532 MYCLP12524 364 aaPredicted RBP5.31□□□□□ -1.56
HDDC2-207ENST00000608532 KELP23276 732 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 CERS1P27544 350 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 NTSR1P30989 418 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 GATMP50440 423 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 ZNF81P51508 661 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 COPB1P53618 953 aaKnown RBP5.31□□□□□ -1.56
HDDC2-207ENST00000608532 TIRAPP58753 221 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 KCNAB1Q14722 419 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 ZNF750Q32MQ0 723 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 SUPT20HL1Q3ZLR7 823 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 ZNF626Q68DY1 528 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 CNGA4Q8IV77 575 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 IPCEF1Q8WWN9 437 aaPredicted RBP5.31□□□□□ -1.56
HDDC2-207ENST00000608532 NRIP3Q9NQ35 241 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 ZNF212Q9UDV6 495 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 CORO2BQ9UQ03 480 aa5.31□□□□□ -1.56
HDDC2-207ENST00000608532 AQP7P3A6NL99 342 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 POC1B-GALNT4F8VUJ3 575 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 F8W8V4 182 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 UBE2Q2LH0YL09 131 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 H7C1Q1 480 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 EXOC5O00471 708 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 INMTO95050 263 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 MT-ND5P03915 603 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 ARHGAP25P42331 645 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 SLC18B1Q6NT16 456 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 MIS18BP1Q6P0N0 1132 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 CATSPERGQ6ZRH7 1159 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 PTCHD4Q6ZW05 846 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 GALNT4Q8N4A0 578 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 SNX22Q96L94 193 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 ZNF778Q96MU6 729 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 NUP62CLQ9H1M0 184 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 DHX36Q9H2U1 1008 aaKnown RBP5.3□□□□□ -1.56
HDDC2-207ENST00000608532 PDGFCQ9NRA1 345 aa5.3□□□□□ -1.56
HDDC2-207ENST00000608532 FER1L4A9Z1Z3 1794 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 AGPSO00116 658 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 SNX2O60749 519 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 LATS1O95835 1130 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 TUBB4AP04350 444 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 PARP1P09874 1014 aaKnown RBP5.29□□□□□ -1.56
HDDC2-207ENST00000608532 BTF3P20290 206 aaKnown RBP5.29□□□□□ -1.56
HDDC2-207ENST00000608532 IL1R2P27930 398 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 LMAN2Q12907 356 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 FAM187BQ17R55 369 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 RRAGBQ5VZM2 374 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 PLAG1Q6DJT9 500 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 KRTAP5-3Q6L8H2 238 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 SLC2A7Q6PXP3 512 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 CLEC9AQ6UXN8 241 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 RNF44Q7L0R7 432 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 BCDIN3DQ7Z5W3 292 aaKnown RBP5.29□□□□□ -1.56
HDDC2-207ENST00000608532 DGKHQ86XP1 1220 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 SFTPA1Q8IWL2 248 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 SMG7Q92540 1137 aaKnown RBP5.29□□□□□ -1.56
HDDC2-207ENST00000608532 CCDC17Q96LX7 622 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 HIST1H2AAQ96QV6 131 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 SEMA4CQ9C0C4 833 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 SNX15Q9NRS6 342 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 MGAT4CQ9UBM8 478 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 FAM50BQ9Y247 325 aa5.29□□□□□ -1.56
HDDC2-207ENST00000608532 RHPN2P1A8MT19 583 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms