RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 XPO4Q9C0E2 1151 aaKnown RBP15.02■□□□□ -0
CTSA-219ENST00000607841 TRPV4Q9HBA0 871 aa15.02■□□□□ -0
CTSA-219ENST00000607841 TRPC7Q9HCX4 862 aa15.02■□□□□ -0
CTSA-219ENST00000607841 GMIPQ9P107 970 aa15.02■□□□□ -0
CTSA-219ENST00000607841 NUMBLQ9Y6R0 609 aa15.02■□□□□ -0
CTSA-219ENST00000607841 TULP2O00295 520 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 NRG2O14511 850 aaPredicted RBP15.01□□□□□ -0.01
CTSA-219ENST00000607841 DPYSL4O14531 572 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 ZBED1O96006 694 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 USP17L7P0C7H9 530 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 ZDHHC11BP0C7U3 371 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 HDCP19113 662 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 PBX1P40424 430 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 TUBP50607 506 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 TDGQ13569 410 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 HTR4Q13639 388 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 PTPN21Q16825 1174 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 HECTD3Q5T447 861 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 PMF1Q6P1K2 205 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 PARM1Q6UWI2 310 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 TADA2BQ86TJ2 420 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 ARID3BQ8IVW6 561 aaPredicted RBP15.01□□□□□ -0.01
CTSA-219ENST00000607841 ZNF397Q8NF99 534 aaPredicted RBP15.01□□□□□ -0.01
CTSA-219ENST00000607841 NUCKS1Q9H1E3 243 aaKnown RBP15.01□□□□□ -0.01
CTSA-219ENST00000607841 RBSNQ9H1K0 784 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 CD320Q9NPF0 282 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 CYLDQ9NQC7 956 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 CNGB3Q9NQW8 809 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 SORCS3Q9UPU3 1222 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.01□□□□□ -0.01
CTSA-219ENST00000607841 C2orf16Q68DN1 1984 aa15.01□□□□□ -0.01
CTSA-219ENST00000607841 ITIH6Q6UXX5 1313 aa15□□□□□ -0.01
CTSA-219ENST00000607841 A0A1W2PQJ5 194 aa15□□□□□ -0.01
CTSA-219ENST00000607841 FBXO21O94952 628 aa15□□□□□ -0.01
CTSA-219ENST00000607841 CKMP06732 381 aa15□□□□□ -0.01
CTSA-219ENST00000607841 RALAP11233 206 aa15□□□□□ -0.01
CTSA-219ENST00000607841 LCP1P13796 627 aa15□□□□□ -0.01
CTSA-219ENST00000607841 FERP16591 822 aa15□□□□□ -0.01
CTSA-219ENST00000607841 RGS7P49802 495 aa15□□□□□ -0.01
CTSA-219ENST00000607841 ADIGQ0VDE8 80 aa15□□□□□ -0.01
CTSA-219ENST00000607841 PM20D1Q6GTS8 502 aa15□□□□□ -0.01
CTSA-219ENST00000607841 POTEHQ6S545 545 aa15□□□□□ -0.01
CTSA-219ENST00000607841 SARM1Q6SZW1 724 aa15□□□□□ -0.01
CTSA-219ENST00000607841 SCML4Q8N228 414 aa15□□□□□ -0.01
CTSA-219ENST00000607841 CELF5Q8N6W0 485 aaKnown RBP15□□□□□ -0.01
CTSA-219ENST00000607841 TMEM35BQ8NCS4 154 aa15□□□□□ -0.01
CTSA-219ENST00000607841 EPS8L1Q8TE68 723 aa15□□□□□ -0.01
CTSA-219ENST00000607841 FGF14Q92915 247 aa15□□□□□ -0.01
CTSA-219ENST00000607841 CDK5RAP1Q96SZ6 601 aaKnown RBP15□□□□□ -0.01
CTSA-219ENST00000607841 ULBP1Q9BZM6 244 aa15□□□□□ -0.01
CTSA-219ENST00000607841 NACA2Q9H009 215 aa15□□□□□ -0.01
CTSA-219ENST00000607841 KIF9Q9HAQ2 790 aa15□□□□□ -0.01
CTSA-219ENST00000607841 ST7Q9NRC1 585 aa15□□□□□ -0.01
CTSA-219ENST00000607841 TDP1Q9NUW8 608 aa15□□□□□ -0.01
CTSA-219ENST00000607841 OBP2AQ9NY56 170 aa15□□□□□ -0.01
CTSA-219ENST00000607841 CLIC5Q9NZA1 410 aa15□□□□□ -0.01
CTSA-219ENST00000607841 C2orf78A6NCI8 922 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 TNFRSF10AO00220 468 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 SART1O43290 800 aaKnown RBP14.99□□□□□ -0.01
CTSA-219ENST00000607841 LSM8O95777 96 aaKnown RBP14.99□□□□□ -0.01
CTSA-219ENST00000607841 OAS1P00973 400 aaKnown RBP14.99□□□□□ -0.01
CTSA-219ENST00000607841 ASGR2P07307 311 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 ALADP13716 330 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 RPL34P49207 117 aaKnown RBP14.99□□□□□ -0.01
CTSA-219ENST00000607841 CDR2Q01850 454 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 ARID5AQ03989 594 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 PDCLQ13371 301 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 ZNF268Q14587 947 aaPredicted RBP14.99□□□□□ -0.01
CTSA-219ENST00000607841 TAF3Q5VWG9 929 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 TANGO2Q6ICL3 276 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 TMEM110Q86TL2 294 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 NOP9Q86U38 636 aaKnown RBP14.99□□□□□ -0.01
CTSA-219ENST00000607841 PASD1Q8IV76 773 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 UBALD2Q8IYN6 164 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 SLC44A3Q8N4M1 653 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 ARL14EPQ8N8R7 260 aaPredicted RBP14.99□□□□□ -0.01
CTSA-219ENST00000607841 DEPDC1BQ8WUY9 529 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 IRGQQ8WZA9 623 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 DDX1Q92499 740 aaKnown RBP14.99□□□□□ -0.01
CTSA-219ENST00000607841 BAP1Q92560 729 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 GOLGA1Q92805 767 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 SLC4A5Q9BY07 1137 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 TTYH3Q9C0H2 523 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 NAGPAQ9UK23 515 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 DENND4AQ7Z401 1863 aa14.99□□□□□ -0.01
CTSA-219ENST00000607841 PTPRDP23468 1912 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 A0A1W2PQH9 124 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 LRRC53A6NM62 1247 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 HEPACAM2A8MVW5 462 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 TLR5O60602 858 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 OLFM2O95897 454 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 CFHP08603 1231 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 TPM1P09493 284 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 RARGP13631 454 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 PSMC3P17980 439 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 FCARP24071 287 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 ATP5C1P36542 298 aaKnown RBP14.98□□□□□ -0.01
CTSA-219ENST00000607841 VIPR2P41587 438 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 YWHAGP61981 247 aaKnown RBP eCLIP14.98□□□□□ -0.01
CTSA-219ENST00000607841 SLC7A9P82251 487 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms