RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 CD248Q9HCU0 757 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 SMPD4Q9NXE4 827 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 CALCOCO1Q9P1Z2 691 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 HCN2Q9UL51 889 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 THADAQ6YHU6 1953 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 DENND4CQ5VZ89 1909 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 A0A1W2PQF6 199 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 BMP15O95972 392 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 KRT19P08727 400 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 NTSR1P30989 418 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 TAF10Q12962 218 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 TDRD10Q5VZ19 366 aaKnown RBP15.96■□□□□ 0.15
SSBP4-214ENST00000607020 C19orf48Q6RUI8 117 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 ZNF513Q8N8E2 541 aaPredicted RBP15.96■□□□□ 0.15
SSBP4-214ENST00000607020 OVCA2Q8WZ82 227 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 SAAL1Q96ER3 474 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 PCED1BQ96HM7 432 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 HPDLQ96IR7 371 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 SLITRK1Q96PX8 696 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 ZDHHC5Q9C0B5 715 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 PDE11AQ9HCR9 933 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 INTS13Q9NVM9 706 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 KIAA1522Q9P206 1035 aaPredicted RBP15.96■□□□□ 0.15
SSBP4-214ENST00000607020 DEC1Q9P2X7 70 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.15
SSBP4-214ENST00000607020 F8VP50 259 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 TULP3O75386 442 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 CD2BP2O95400 341 aaKnown RBP15.95■□□□□ 0.14
SSBP4-214ENST00000607020 TMEM191BP0C7N4 346 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 FTH1P19P0C7X4 201 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 GAP43P17677 238 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 PSMC1P62191 440 aaKnown RBP15.95■□□□□ 0.14
SSBP4-214ENST00000607020 CYP27A1Q02318 531 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 KDSRQ06136 332 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 COL28A1Q2UY09 1125 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 SNX30Q5VWJ9 437 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 BTBD8Q5XKL5 378 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 DEFB119Q8N690 84 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 TRIML1Q8N9V2 468 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 TERB1Q8NA31 727 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 OR2I1PQ8NGU4 316 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 ZFRQ96KR1 1074 aaKnown RBP15.95■□□□□ 0.14
SSBP4-214ENST00000607020 CAMK1GQ96NX5 476 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 MTMR12Q9C0I1 747 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 MRPL44Q9H9J2 332 aaKnown RBP15.95■□□□□ 0.14
SSBP4-214ENST00000607020 ZDHHC4Q9NPG8 344 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 SCUBE2Q9NQ36 999 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 OLFML3Q9NRN5 406 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 DKK4Q9UBT3 224 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 SUSD2Q9UGT4 822 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 R3HCC1Q9Y3T6 440 aaKnown RBP15.95■□□□□ 0.14
SSBP4-214ENST00000607020 PCDHB9Q9Y5E1 797 aa15.95■□□□□ 0.14
SSBP4-214ENST00000607020 KIAA0391O15091 583 aaKnown RBP15.94■□□□□ 0.14
SSBP4-214ENST00000607020 ZBTB24O43167 697 aaPredicted RBP15.94■□□□□ 0.14
SSBP4-214ENST00000607020 CBFA2T3O75081 653 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 TACC1O75410 805 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 PDGFRBP09619 1106 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 MBL2P11226 248 aaPredicted RBP15.94■□□□□ 0.14
SSBP4-214ENST00000607020 HOXB2P14652 356 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 GRIN1Q05586 938 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 ALCAMQ13740 583 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 PDZD8Q8NEN9 1154 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 RASSF8Q8NHQ8 419 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 FOXJ1Q92949 421 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 DNAJC19Q96DA6 116 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 ANKRD36BP1Q96IX9 119 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 FAM84AQ96KN4 292 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 SPHK2Q9NRA0 654 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 APOBEC2Q9Y235 224 aaKnown RBP15.94■□□□□ 0.14
SSBP4-214ENST00000607020 NFE2L3Q9Y4A8 694 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 IGSF10Q6WRI0 2623 aa15.94■□□□□ 0.14
SSBP4-214ENST00000607020 GOLGA8IPA6NC78 632 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 GOLGA8JA6NMD2 632 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 SCAMP3O14828 347 aaKnown RBP15.93■□□□□ 0.14
SSBP4-214ENST00000607020 COCHO43405 550 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 ABL1P00519 1130 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 GNSP15586 552 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 GNL1P36915 607 aaPredicted RBP15.93■□□□□ 0.14
SSBP4-214ENST00000607020 TUBP50607 506 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 SURF1Q15526 300 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 DUOXA2Q1HG44 320 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 PLEKHG6Q3KR16 790 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 C10orf76Q5T2E6 689 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 SYCP2LQ5T4T6 812 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 TOGARAM2Q6ZUX3 1019 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 DYMQ7RTS9 669 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 MIB1Q86YT6 1006 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 NAXDQ8IW45 347 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 OR5B17Q8NGF7 314 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 IPO4Q8TEX9 1081 aaKnown RBP15.93■□□□□ 0.14
SSBP4-214ENST00000607020 HSPA12BQ96MM6 686 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 GABRG3Q99928 467 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 CBWD1Q9BRT8 395 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 ELOVL4Q9GZR5 314 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 IL37Q9NZH6 218 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 STK17AQ9UEE5 414 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 KIAA1549LQ6ZVL6 1849 aa15.93■□□□□ 0.14
SSBP4-214ENST00000607020 FLNBO75369 2602 aaKnown RBP15.92■□□□□ 0.14
SSBP4-214ENST00000607020 RTN3O95197 1032 aaPredicted RBP15.92■□□□□ 0.14
SSBP4-214ENST00000607020 PTPN1P18031 435 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms