RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 C4orf50Q6ZRC1 276 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 ANKS1BQ7Z6G8 1248 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 CMASQ8NFW8 434 aaPredicted RBP22.6■■□□□ 1.21
USP6NL-204ENST00000606752 HERPUD2Q9BSE4 406 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 RHOBTB2Q9BYZ6 727 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 GPR62Q9BZJ7 368 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 ZCWPW1Q9H0M4 648 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 LRRC19Q9H756 370 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 CNGB3Q9NQW8 809 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 PRDM5Q9NQX1 630 aaPredicted RBP22.6■■□□□ 1.21
USP6NL-204ENST00000606752 GDF3Q9NR23 364 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.6■■□□□ 1.21
USP6NL-204ENST00000606752 SF3B1O75533 1304 aaKnown RBP eCLIP22.59■■□□□ 1.212e-6■■■■■ 66.5
USP6NL-204ENST00000606752 LRRD1A4D1F6 860 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 DGKIO75912 1065 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 PTPN7P35236 360 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 YWHAZP63104 245 aaKnown RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 ELAVL2Q12926 359 aaKnown RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 MRPL58Q14197 206 aaKnown RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 CDO1Q16878 200 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 SMTNL2Q2TAL5 461 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 KCNT1Q5JUK3 1230 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 VARS2Q5ST30 1063 aaKnown RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 SPOCD1Q6ZMY3 1216 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 MTERF4Q7Z6M4 381 aaKnown RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 SPATA2LQ8IUW3 424 aaPredicted RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 DCP1BQ8IZD4 617 aaKnown RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 C12orf50Q8NA57 414 aaPredicted RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 FAM172AQ8WUF8 416 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 RUNDC3BQ96NL0 473 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 C11orf84Q9BUA3 381 aaPredicted RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 PLEKHA4Q9H4M7 779 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 EPB41L5Q9HCM4 733 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 NGRNQ9NPE2 291 aaKnown RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 DMAP1Q9NPF5 467 aaPredicted RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 PCYOX1Q9UHG3 505 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 PRPSAP2O60256 369 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 RAG1P15918 1043 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 FGFR3P22607 806 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 TNFRSF8P28908 595 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 MATKP42679 507 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 CDKN2BP42772 138 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 DHX34Q14147 1143 aaKnown RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 TFDP3Q5H9I0 405 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 FUT10Q6P4F1 479 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 NDRG1Q92597 394 aaKnown RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 CENPIQ92674 756 aaPredicted RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 FAM149B1Q96BN6 582 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 ACSF2Q96CM8 615 aaPredicted RBP22.59■■□□□ 1.21
USP6NL-204ENST00000606752 PNPLA8Q9NP80 782 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 HOMER3Q9NSC5 361 aa22.59■■□□□ 1.21
USP6NL-204ENST00000606752 C3orf70A6NLC5 250 aaPredicted RBP22.58■■□□□ 1.21
USP6NL-204ENST00000606752 TTI1O43156 1089 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 TJP3O95049 919 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 CSF2RAP15509 400 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 RABGGTBP53611 331 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 DR1Q01658 176 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 MAP9Q49MG5 647 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 RAB6CQ53S08 254 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 BOLA3Q53S33 107 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 BEND6Q5SZJ8 279 aaPredicted RBP22.58■■□□□ 1.21
USP6NL-204ENST00000606752 GPRIN1Q7Z2K8 1008 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 CEP57Q86XR8 500 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 TOP1MTQ969P6 601 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 PEBP4Q96S96 227 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 ULBP1Q9BZM6 244 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 RAB6CQ9H0N0 254 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 ZNF446Q9NWS9 450 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 EFR3BQ9Y2G0 817 aa22.58■■□□□ 1.21
USP6NL-204ENST00000606752 MICAL3Q7RTP6 2002 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 NT5C1B-RDH14C9J2C7 533 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 KDELR1P24390 212 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 COILP38432 576 aaPredicted RBP22.57■■□□□ 1.2
USP6NL-204ENST00000606752 FNTAP49354 379 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 DAOAP59103 153 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 CTXN3Q4LDR2 81 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 SLC39A12Q504Y0 691 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 MFSD5Q6N075 450 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 CCDC137Q6PK04 289 aaKnown RBP22.57■■□□□ 1.2
USP6NL-204ENST00000606752 CYP4V2Q6ZWL3 525 aaPredicted RBP22.57■■□□□ 1.2
USP6NL-204ENST00000606752 DEFB106AQ8N104 65 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 TMEM199Q8N511 208 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 KCTD6Q8NC69 237 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 hCG_1818297A0A087WSY0 165 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 FAM187AA6NFU0 413 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 ZSCAN5CA6NGD5 496 aaPredicted RBP22.57■■□□□ 1.2
USP6NL-204ENST00000606752 DAB1O75553 588 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 SEC31AO94979 1220 aaKnown RBP22.57■■□□□ 1.2
USP6NL-204ENST00000606752 OR4Q2P0C623 313 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 KRT10P13645 584 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 ALDH7A1P49419 539 aaKnown RBP22.57■■□□□ 1.2
USP6NL-204ENST00000606752 HDAC4P56524 1084 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 NFE2Q16621 373 aaPredicted RBP22.57■■□□□ 1.2
USP6NL-204ENST00000606752 KAZNQ674X7 775 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 SCYL2Q6P3W7 929 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 TTC27Q6P3X3 843 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 C1orf54Q8WWF1 131 aa22.57■■□□□ 1.2
USP6NL-204ENST00000606752 OR6C75A6NL08 312 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 BHMG1C9JSJ3 638 aaPredicted RBP22.56■■□□□ 1.2
USP6NL-204ENST00000606752 EFCAB14O75071 495 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms