RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 AKAP3O75969 853 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 BEST1O76090 585 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 RHOBTB3O94955 611 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 APBB3O95704 486 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 ASS1P00966 412 aaKnown RBP8.08□□□□□ -1.12
CUX1-219ENST00000606749 CYP17A1P05093 508 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 ZDHHC11BP0C7U3 371 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 PRR29P0C7W0 189 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 ZNF806P0C7X5 589 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 P4HA1P13674 534 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 SLC6A11P48066 632 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 VAMP7P51809 220 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 NDST1P52848 882 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 SLC5A3P53794 718 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 SEC13P55735 322 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 KRT85P78386 507 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 DPYDQ12882 1025 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 CCDC6Q16204 474 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 NFIL3Q16649 462 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 C2orf27AQ580R0 203 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 HECTD3Q5T447 861 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 SPOPLQ6IQ16 392 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 SCARA5Q6ZMJ2 495 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 FAM35AQ86V20 835 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 UNC93AQ86WB7 457 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 DDX42Q86XP3 938 aaKnown RBP eCLIP8.08□□□□□ -1.12
CUX1-219ENST00000606749 SFTPA1Q8IWL2 248 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 FUKQ8N0W3 1084 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 C12orf29Q8N999 325 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 PDZD8Q8NEN9 1154 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 ZMIZ2Q8NF64 920 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 TAF4BQ92750 862 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 ACDQ96AP0 544 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 SMARCD1Q96GM5 515 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 ZFRQ96KR1 1074 aaKnown RBP8.08□□□□□ -1.12
CUX1-219ENST00000606749 SMOQ99835 787 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 DUSP15Q9H1R2 295 aaPredicted RBP8.08□□□□□ -1.12
CUX1-219ENST00000606749 CSNK1G1Q9HCP0 422 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 DMAP1Q9NPF5 467 aaPredicted RBP8.08□□□□□ -1.12
CUX1-219ENST00000606749 TBC1D14Q9P2M4 693 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 MAPK8IP1Q9UQF2 711 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 FRMD4BQ9Y2L6 1034 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 RALGAPA1Q6GYQ0 2036 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 DCLK1O15075 740 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 CLSTN1O94985 981 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 ZNF202O95125 648 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 EPN2O95208 641 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 KIF20AO95235 890 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 HLA-DRAP01903 254 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 CCDC130P13994 396 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 EIF2DP41214 584 aaKnown RBP8.07□□□□□ -1.12
CUX1-219ENST00000606749 ASPAP45381 313 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 PGFP49763 221 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 TUBP50607 506 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 DGKEP52429 567 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 MAP3K7CLP57077 242 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 MCCD1P59942 119 aaPredicted RBP8.07□□□□□ -1.12
CUX1-219ENST00000606749 MRPS21P82921 87 aaKnown RBP8.07□□□□□ -1.12
CUX1-219ENST00000606749 MESP2Q0VG99 397 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 ORC1Q13415 861 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 SF3A2Q15428 464 aaKnown RBP8.07□□□□□ -1.12
CUX1-219ENST00000606749 PLK5Q496M5 336 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 PLA2G2CQ5R387 149 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 LY6G5CQ5SRR4 150 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 EMC10Q5UCC4 262 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 C12orf40Q86WS4 652 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 CCDC33Q8N5R6 958 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 SLC2A14Q8TDB8 520 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 CCDC47Q96A33 483 aaKnown RBP8.07□□□□□ -1.12
CUX1-219ENST00000606749 OTUB2Q96DC9 234 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 PNKPQ96T60 521 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 HNRNPABQ99729 332 aaKnown RBP8.07□□□□□ -1.12
CUX1-219ENST00000606749 SCAND2PQ9GZW5 306 aaPredicted RBP8.07□□□□□ -1.12
CUX1-219ENST00000606749 FBXO44Q9H4M3 255 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 CCSER2Q9H7U1 834 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.07□□□□□ -1.121e-6■■■■■ 56.1
CUX1-219ENST00000606749 KRT82Q9NSB4 513 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 RXFP3Q9NSD7 469 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 GMIPQ9P107 970 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 HMGXB4Q9UGU5 601 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 INVSQ9Y283 1065 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 PCDHGA5Q9Y5G8 931 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 SDK1Q7Z5N4 2213 aa8.07□□□□□ -1.12
CUX1-219ENST00000606749 HELZP42694 1942 aaKnown RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 CEP250Q9BV73 2442 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 A0A1W2PQ27 194 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 A0A1W2PQ64 194 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 A0A1W2PQD8 194 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 HHLA1C9JL84 531 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 TM4SF5O14894 197 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 RHOBTB1O94844 696 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 KAT7O95251 611 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 TBX18O95935 607 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 ADH1CP00326 375 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 APODP05090 189 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 TRIM49P0CI25 452 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 TRIM49CP0CI26 452 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 CHRM1P11229 460 aaPredicted RBP8.06□□□□□ -1.12
CUX1-219ENST00000606749 ADH5P11766 374 aa8.06□□□□□ -1.12
CUX1-219ENST00000606749 HNRNPLP14866 589 aaKnown RBP eCLIP8.06□□□□□ -1.122e-14■■■■■ 48.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms