RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 IGSF10Q6WRI0 2623 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 OTOL1A6NHN0 477 aaPredicted RBP13.15□□□□□ -0.3
HLA-F-230ENST00000606273 POLR2DO15514 142 aaKnown RBP13.15□□□□□ -0.3
HLA-F-230ENST00000606273 CMA1P23946 247 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 CASP1P29466 404 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 STAT6P42226 847 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 MAPK8P45983 427 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 GALK1P51570 392 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 FAM187BQ17R55 369 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 CTXN3Q4LDR2 81 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 USP39Q53GS9 565 aaKnown RBP13.15□□□□□ -0.3
HLA-F-230ENST00000606273 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 C20orf204Q6ZNR8 217 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 PIGKQ92643 395 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 FAM83CQ9BQN1 747 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 GKN1Q9NS71 199 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 THG1LQ9NWX6 298 aaKnown RBP13.15□□□□□ -0.3
HLA-F-230ENST00000606273 VWA8A3KMH1 1905 aa13.15□□□□□ -0.3
HLA-F-230ENST00000606273 FAM237AA0A1B0GTK4 181 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 SMIM28A0A1B0GU29 152 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 N4BP3O15049 544 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
HLA-F-230ENST00000606273 NID1P14543 1247 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 DRD1P21728 446 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 WEE1P30291 646 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 NDUFA8P51970 172 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 DGKEP52429 567 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 SOX4Q06945 474 aaPredicted RBP13.14□□□□□ -0.31
HLA-F-230ENST00000606273 RUNX3Q13761 415 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 DMC1Q14565 340 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 ZNF423Q2M1K9 1284 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 GAREM2Q75VX8 874 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 DYMQ7RTS9 669 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 GRAMD1CQ8IYS0 662 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 DNAJC19Q96DA6 116 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 DNAJC25Q9H1X3 360 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 TMEM74BQ9NUR3 256 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 RAXQ9Y2V3 346 aa13.14□□□□□ -0.31
HLA-F-230ENST00000606273 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 LRRIQ4A6NIV6 560 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 VNN2O95498 520 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 PRAMEF12O95522 483 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 PRB1P04280 392 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 ENGP17813 658 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 BCKDHBP21953 392 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 NAMPTP43490 491 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 NPTX2P47972 431 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 DHPSP49366 369 aaPredicted RBP13.13□□□□□ -0.31
HLA-F-230ENST00000606273 PEX3P56589 373 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
HLA-F-230ENST00000606273 FBXO43Q4G163 708 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 GPR158Q5T848 1215 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 EEF1DP3Q658K8 133 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 CDCA2Q69YH5 1023 aaPredicted RBP13.13□□□□□ -0.31
HLA-F-230ENST00000606273 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
HLA-F-230ENST00000606273 SV2BQ7L1I2 683 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 DNAJB7Q7Z6W7 309 aaPredicted RBP13.13□□□□□ -0.31
HLA-F-230ENST00000606273 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 BEST2Q8NFU1 509 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 RPLP0P6Q8NHW5 317 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 MDM1Q8TC05 714 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 KIFAP3Q92845 792 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 FIZ1Q96SL8 496 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 NUSAP1Q9BXS6 441 aaKnown RBP13.13□□□□□ -0.31
HLA-F-230ENST00000606273 CCDC113Q9H0I3 377 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 ATXN3LQ9H3M9 355 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 HPS4Q9NQG7 708 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 KBTBD4Q9NVX7 518 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 FAM13BQ9NYF5 915 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 MBD1Q9UIS9 605 aaPredicted RBP13.13□□□□□ -0.31
HLA-F-230ENST00000606273 YIPF1Q9Y548 306 aa13.13□□□□□ -0.31
HLA-F-230ENST00000606273 HELZ2Q9BYK8 2649 aaKnown RBP13.13□□□□□ -0.31
HLA-F-230ENST00000606273 CELSR3Q9NYQ7 3312 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 SLC16A4O15374 487 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 PLS3P13797 630 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 ZNF131P52739 623 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 EPHB3P54753 998 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 AMPD2Q01433 879 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 SLC23A3Q6PIS1 610 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 EZH1Q92800 747 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-230ENST00000606273 ADPGKQ9BRR6 497 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 TPSD1Q9BZJ3 242 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 EBF3Q9H4W6 596 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 TASP1Q9H6P5 420 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 KCND2Q9NZV8 630 aa13.12□□□□□ -0.31
HLA-F-230ENST00000606273 CCDC169A6NNP5 214 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 ACKR2O00590 384 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 PODXLO00592 558 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 C1QL1O75973 258 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 CPB1P15086 417 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 ITGB7P26010 798 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 AFMP43652 599 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 DUSP4Q13115 394 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 PLD1Q13393 1074 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 XKR4Q5GH76 650 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 TRIM68Q6AZZ1 485 aa13.11□□□□□ -0.31
HLA-F-230ENST00000606273 ZNF280DQ6N043 979 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms