RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 LEFTY2O00292 366 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 SCAMP3O14828 347 aaKnown RBP15.22■□□□□ 0.03
TUBE1-208ENST00000604743 OAS1P00973 400 aaKnown RBP15.22■□□□□ 0.03
TUBE1-208ENST00000604743 IFNAR2P48551 515 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 ZXDBP98169 803 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 USP4Q13107 963 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 RUNX3Q13761 415 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 ANGPT1Q15389 498 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 GOLGA7BQ2TAP0 167 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 SGO2Q562F6 1265 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 HECTD3Q5T447 861 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 TXNDC11Q6PKC3 985 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 NACA2Q9H009 215 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 INTS2Q9H0H0 1204 aaKnown RBP15.22■□□□□ 0.03
TUBE1-208ENST00000604743 FAM124BQ9H5Z6 455 aaPredicted RBP15.22■□□□□ 0.03
TUBE1-208ENST00000604743 CCSER2Q9H7U1 834 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 HPS4Q9NQG7 708 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 SPATA6Q9NWH7 488 aaPredicted RBP15.22■□□□□ 0.03
TUBE1-208ENST00000604743 IL37Q9NZH6 218 aa15.22■□□□□ 0.03
TUBE1-208ENST00000604743 CACNA1HO95180 2353 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 CYP26A1O43174 497 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 COCHO43405 550 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 CALCAP01258 141 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 PFKLP17858 780 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 CTHP32929 405 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 PGFP49763 221 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 SLC7A9P82251 487 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 PON2Q15165 354 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 PDGFRLQ15198 375 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 ARHGAP17Q68EM7 881 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 IRF2BP1Q8IU81 584 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 UBR7Q8N806 425 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 OSCP1Q8WVF1 389 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 PHOX2BQ99453 314 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 OSBPL6Q9BZF3 934 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 LINC00597Q9H2U6 94 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 LMAN1LQ9HAT1 526 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 TLR8Q9NR97 1041 aaKnown RBP15.21■□□□□ 0.03
TUBE1-208ENST00000604743 TSPAN16Q9UKR8 245 aa15.21■□□□□ 0.03
TUBE1-208ENST00000604743 FAM92AA1XBS5 289 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 OTOL1A6NHN0 477 aaPredicted RBP15.2■□□□□ 0.02
TUBE1-208ENST00000604743 RNF225M0QZC1 329 aaPredicted RBP15.2■□□□□ 0.02
TUBE1-208ENST00000604743 OLFM2O95897 454 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 IRF1P10914 325 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 VDRP11473 427 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 ERCC5P28715 1186 aaPredicted RBP15.2■□□□□ 0.02
TUBE1-208ENST00000604743 SLC8A3P57103 927 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 TTC30AQ86WT1 665 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 RALGPS2Q86X27 583 aaPredicted RBP15.2■□□□□ 0.02
TUBE1-208ENST00000604743 C1orf210Q8IVY1 113 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 FAM114A1Q8IWE2 563 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 ANKRD52Q8NB46 1076 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 UBA3Q8TBC4 463 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 MSANTD3Q96H12 275 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 IRF2BPLQ9H1B7 796 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 THAP9Q9H5L6 903 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 ECT2Q9H8V3 914 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 PNPLA8Q9NP80 782 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 UBE2TQ9NPD8 197 aaPredicted RBP15.2■□□□□ 0.02
TUBE1-208ENST00000604743 RBM12Q9NTZ6 932 aaKnown RBP15.2■□□□□ 0.02
TUBE1-208ENST00000604743 CFAP97Q9P2B7 532 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 HESX1Q9UBX0 185 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 NUDT5Q9UKK9 219 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 SCML2Q9UQR0 700 aa15.2■□□□□ 0.02
TUBE1-208ENST00000604743 A0A1W2PQH9 124 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 TULP2O00295 520 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 TLR5O60602 858 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 TBX18O95935 607 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 ZDHHC11BP0C7U3 371 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 KRT5P13647 590 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 PRKCSHP14314 528 aaPredicted RBP15.19■□□□□ 0.02
TUBE1-208ENST00000604743 SLC9A1P19634 815 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 KIF11P52732 1056 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 MLLT6P55198 1093 aaPredicted RBP15.19■□□□□ 0.02
TUBE1-208ENST00000604743 GCNT1Q02742 428 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 PDE4CQ08493 712 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 FZD5Q13467 585 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 EML3Q32P44 896 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 SNX30Q5VWJ9 437 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 GJB7Q6PEY0 223 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 SASS6Q6UVJ0 657 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 GBP6Q6ZN66 633 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 PIGZQ86VD9 579 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 CPA6Q8N4T0 437 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 RBBP8NLQ8NC74 664 aaPredicted RBP15.19■□□□□ 0.02
TUBE1-208ENST00000604743 ATP2A3Q93084 1043 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 CLDN23Q96B33 292 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 KREMEN1Q96MU8 473 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 NMUR1Q9HB89 426 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 SAMSN1Q9NSI8 373 aaKnown RBP15.19■□□□□ 0.02
TUBE1-208ENST00000604743 OSER1Q9NX31 292 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 NAGPAQ9UK23 515 aa15.19■□□□□ 0.02
TUBE1-208ENST00000604743 PES1O00541 588 aaKnown RBP15.18■□□□□ 0.02
TUBE1-208ENST00000604743 LAMTOR5O43504 91 aa15.18■□□□□ 0.02
TUBE1-208ENST00000604743 MBD3O95983 291 aa15.18■□□□□ 0.02
TUBE1-208ENST00000604743 PAEPP09466 180 aa15.18■□□□□ 0.02
TUBE1-208ENST00000604743 CHRNB1P11230 501 aa15.18■□□□□ 0.02
TUBE1-208ENST00000604743 RARGP13631 454 aa15.18■□□□□ 0.02
TUBE1-208ENST00000604743 TCF3P15923 654 aa15.18■□□□□ 0.02
TUBE1-208ENST00000604743 BRD2P25440 801 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms