RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 NBL1P41271 181 aa25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 PPP1R26Q5T8A7 1209 aaPredicted RBP25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 CPA6Q8N4T0 437 aa25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 ANKRD52Q8NB46 1076 aa25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 SCAMP5Q8TAC9 235 aa25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 SH3RF2Q8TEC5 729 aa25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 SLC22A12Q96S37 553 aa25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 CHRDQ9H2X0 955 aa25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 GTSE1Q9NYZ3 720 aa25.09■■□□□ 1.61
SSX2IP-209ENST00000603677 H0Y858 1186 aa25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 PAEPP09466 180 aa25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 ADORA2BP29275 332 aa25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 PPP2R5DQ14738 602 aa25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 KLHDC10Q6PID8 442 aa25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 GPIHBP1Q8IV16 184 aa25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 FAM114A1Q8IWE2 563 aa25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 EHBP1Q8NDI1 1231 aa25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 LMO3Q8TAP4 145 aa25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 DUS2Q9NX74 493 aaKnown RBP25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 MTF2Q9Y483 593 aaPredicted RBP25.08■■□□□ 1.61
SSX2IP-209ENST00000603677 HHLA1C9JL84 531 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 LAMTOR5O43504 91 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 BEST1O76090 585 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 VDRP11473 427 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 HOXD11P31277 338 aaPredicted RBP25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 IFNAR2P48551 515 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 ORC1Q13415 861 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 STILQ15468 1287 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 ZNF394Q53GI3 561 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 SGO2Q562F6 1265 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 TADA2BQ86TJ2 420 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 UBR7Q8N806 425 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 OTUB2Q96DC9 234 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 ZFYVE19Q96K21 471 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 CDK5RAP1Q96SZ6 601 aaKnown RBP25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 FAM126AQ9BYI3 521 aaPredicted RBP25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 RNF38Q9H0F5 515 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 THAP9Q9H5L6 903 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 TBC1D14Q9P2M4 693 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 USP3Q9Y6I4 520 aa25.07■■□□□ 1.6
SSX2IP-209ENST00000603677 E2F8A0AVK6 867 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 GTPBP10A4D1E9 387 aaKnown RBP25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 NFATC1O95644 943 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 ABL1P00519 1130 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 CHRNB1P11230 501 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 KIF11P52732 1056 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 ZC3H14Q6PJT7 736 aaKnown RBP25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 ENOSF1Q7L5Y1 443 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 CCDC186Q7Z3E2 898 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 CCDC26Q8TAB7 109 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 ARID3AQ99856 593 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 LMAN1LQ9HAT1 526 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 CYLDQ9NQC7 956 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 HPS4Q9NQG7 708 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 HESX1Q9UBX0 185 aa25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 CHORDC1Q9UHD1 332 aaPredicted RBP25.06■■□□□ 1.6
SSX2IP-209ENST00000603677 CACNA1IQ9P0X4 2223 aa25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 LEFTY2O00292 366 aa25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 TRDMT1O14717 391 aaKnown RBP25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 IFRD2Q12894 506 aaPredicted RBP25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 TPD52L1Q16890 204 aaPredicted RBP25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 ARHGAP18Q8N392 663 aa25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 PPM1KQ8N3J5 372 aa25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 EBF3Q9H4W6 596 aa25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 ECT2Q9H8V3 914 aa25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 SPATA6Q9NWH7 488 aaPredicted RBP25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 CLIC5Q9NZA1 410 aa25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 NDRG2Q9UN36 371 aaKnown RBP25.05■■□□□ 1.6
SSX2IP-209ENST00000603677 ACO1P21399 889 aaKnown RBP25.04■■□□□ 1.6
SSX2IP-209ENST00000603677 BCAT1P54687 386 aa25.04■■□□□ 1.6
SSX2IP-209ENST00000603677 TNK2Q07912 1038 aa25.04■■□□□ 1.6
SSX2IP-209ENST00000603677 EML3Q32P44 896 aa25.04■■□□□ 1.6
SSX2IP-209ENST00000603677 RAB41Q5JT25 222 aa25.04■■□□□ 1.6
SSX2IP-209ENST00000603677 CNOT6LQ96LI5 555 aaKnown RBP25.04■■□□□ 1.6
SSX2IP-209ENST00000603677 CPQQ9Y646 472 aa25.04■■□□□ 1.6
SSX2IP-209ENST00000603677 COCHO43405 550 aa25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 MBL2P11226 248 aaPredicted RBP25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 CCR3P51677 355 aa25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 GOLGA8FQ08AF8 430 aa25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 GOLGA8DPQ0D2H9 430 aa25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 GRSF1Q12849 480 aaKnown RBP eCLIP25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 FBXO43Q4G163 708 aa25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 SPEM1Q8N4L4 309 aa25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 RIN3Q8TB24 985 aa25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 GMIPQ9P107 970 aa25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 CNTN6Q9UQ52 1028 aa25.03■■□□□ 1.6
SSX2IP-209ENST00000603677 XPO1O14980 1071 aaKnown RBP25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 TLR5O60602 858 aa25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 PAPSS2O95340 614 aaPredicted RBP25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 SETSIPP0DME0 302 aa25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 DRD1P21728 446 aa25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 ATP5C1P36542 298 aaKnown RBP25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 BST2Q10589 180 aaKnown RBP25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 CCINQ13939 588 aa25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 MEA1Q16626 185 aa25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 TMEM196Q5HYL7 178 aa25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 LCLAT1Q6UWP7 414 aa25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 RBM43Q6ZSC3 357 aaKnown RBP25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 SCML4Q8N228 414 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms