RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 NT5C1BQ96P26 610 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 GBP4Q96PP9 640 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 DUSP16Q9BY84 665 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 NUP62CLQ9H1M0 184 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 PNPLA8Q9NP80 782 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 SMPD4Q9NXE4 827 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 CPQQ9Y646 472 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 WNT6Q9Y6F9 365 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 ZFHX2Q9C0A1 2572 aaPredicted RBP23.12■■□□□ 1.29
PPFIA3-208ENST00000602726 MBL2P11226 248 aaPredicted RBP23.12■■□□□ 1.29
PPFIA3-208ENST00000602726 AMPD2Q01433 879 aa23.12■■□□□ 1.29
PPFIA3-208ENST00000602726 LRRC32Q14392 662 aa23.12■■□□□ 1.29
PPFIA3-208ENST00000602726 SNX30Q5VWJ9 437 aa23.12■■□□□ 1.29
PPFIA3-208ENST00000602726 CPA6Q8N4T0 437 aa23.12■■□□□ 1.29
PPFIA3-208ENST00000602726 ATP2A3Q93084 1043 aa23.12■■□□□ 1.29
PPFIA3-208ENST00000602726 LMBRD1Q9NUN5 540 aa23.12■■□□□ 1.29
PPFIA3-208ENST00000602726 OTOL1A6NHN0 477 aaPredicted RBP23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 HHLA1C9JL84 531 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 AFPP02771 609 aaKnown RBP23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 ZDHHC11BP0C7U3 371 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 CHRNB1P11230 501 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 ACO1P21399 889 aaKnown RBP23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 NBL1P41271 181 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 ZXDBP98169 803 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 PON2Q15165 354 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 GPRIN1Q7Z2K8 1008 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 DDX42Q86XP3 938 aaKnown RBP eCLIP23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 CREBRFQ8IUR6 639 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 NACA2Q9H009 215 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 CHRDQ9H2X0 955 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 TLR8Q9NR97 1041 aaKnown RBP23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 SCML2Q9UQR0 700 aa23.11■■□□□ 1.29
PPFIA3-208ENST00000602726 HELZP42694 1942 aaKnown RBP23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 COCHO43405 550 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 SP9P0CG40 484 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 TUBP50607 506 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 SLC8A3P57103 927 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 MTAPQ13126 283 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 EML3Q32P44 896 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 DGKKQ5KSL6 1271 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 ARHGAP17Q68EM7 881 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 PPM1KQ8N3J5 372 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 IPO9Q96P70 1041 aaKnown RBP23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 IER2Q9BTL4 223 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 LINC00597Q9H2U6 94 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 CCSER2Q9H7U1 834 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 ECT2Q9H8V3 914 aa23.1■■□□□ 1.29
PPFIA3-208ENST00000602726 CD19P15391 556 aa23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 CSTF1Q05048 431 aaKnown RBP23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 NR1H3Q13133 447 aa23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 TPD52L1Q16890 204 aaPredicted RBP23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 SGO2Q562F6 1265 aa23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 MAML2Q8IZL2 1156 aaPredicted RBP23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 KIAA1958Q8N8K9 716 aa23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 EHBP1Q8NDI1 1231 aa23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 LMO3Q8TAP4 145 aa23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 CNOT6LQ96LI5 555 aaKnown RBP23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 RBM12Q9NTZ6 932 aaKnown RBP23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 CFAP97Q9P2B7 532 aa23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 FBXO4Q9UKT5 387 aa23.09■■□□□ 1.29
PPFIA3-208ENST00000602726 PATJQ8NI35 1801 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 PROB1E7EW31 1015 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 SLC9A3R1O14745 358 aaPredicted RBP23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 CYP26A1O43174 497 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 NFATC1O95644 943 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 KIF11P52732 1056 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 UBR7Q8N806 425 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 ANKRD52Q8NB46 1076 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 EXOC4Q96A65 974 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 MED15Q96RN5 788 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 UBXN6Q9BZV1 441 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 KIAA1257Q9ULG3 409 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 PCDHB4Q9Y5E5 795 aa23.08■■□□□ 1.29
PPFIA3-208ENST00000602726 GOLGA6L22H0YM25 854 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 TLR5O60602 858 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 VDRP11473 427 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 GJA4P35212 333 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 PGFP49763 221 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 GRSF1Q12849 480 aaKnown RBP eCLIP23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 GOLGA7BQ2TAP0 167 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 TMEM270Q6UE05 265 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 RRAGAQ7L523 313 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 HESX1Q9UBX0 185 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 DACH1Q9UI36 760 aa23.07■■□□□ 1.28
PPFIA3-208ENST00000602726 TRDMT1O14717 391 aaKnown RBP23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 CCINQ13939 588 aa23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 ZNF528Q3MIS6 628 aa23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 DPCR1Q3MIW9 517 aa23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 ZC3H14Q6PJT7 736 aaKnown RBP23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 MAMSTRQ6ZN01 415 aa23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 SYNPOQ8N3V7 929 aa23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 KAT5Q92993 513 aa23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 INTS2Q9H0H0 1204 aaKnown RBP23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 TSPAN16Q9UKR8 245 aa23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 SH3BP1Q9Y3L3 701 aa23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 R4GN57 208 aa23.06■■□□□ 1.28
PPFIA3-208ENST00000602726 VPS13AQ96RL7 3174 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 MYO16Q9Y6X6 1858 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 A0A1W2PQH9 124 aa23.05■■□□□ 1.28
PPFIA3-208ENST00000602726 E2F8A0AVK6 867 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms