RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 CRISPLD1Q9H336 500 aa18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 MRPL47Q9HD33 250 aaKnown RBP18.22■□□□□ 0.51
PPFIA3-207ENST00000602716 PROSCO94903 275 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 KRT3P12035 628 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 PAFAH1B1P43034 410 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 RNASE9P60153 205 aaKnown RBP18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 ELAVL2Q12926 359 aaKnown RBP18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 SDHAF4Q5VUM1 108 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 DCUN1D2Q6PH85 259 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 SYCE1Q8N0S2 351 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 GOLGA6L1Q8N7Z2 621 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 AUTS2Q8WXX7 1259 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 RIN2Q8WYP3 895 aaPredicted RBP18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 CD101Q93033 1021 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 ZBED2Q9BTP6 218 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 SLC4A7Q9Y6M7 1214 aa18.21■□□□□ 0.51
PPFIA3-207ENST00000602716 SIGLEC16A6NMB1 481 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 F8VP50 259 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 SOAT2O75908 522 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 TNFRSF8P28908 595 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 SPATA2LQ8IUW3 424 aaPredicted RBP18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 ATAD1Q8NBU5 361 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 CSNK1G1Q9HCP0 422 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 STIM2Q9P246 746 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 WDR35Q9P2L0 1181 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 TMEM59LQ9UK28 342 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 AMFRQ9UKV5 643 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 MYO1FO00160 1098 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 TAS2R40P59535 323 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 RPS6KA1Q15418 735 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 MS4A14Q96JA4 679 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 HSFY1Q96LI6 401 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 HINFPQ9BQA5 517 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 LBHD1Q9BQE6 289 aaPredicted RBP18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 ADAM33Q9BZ11 813 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 CHST7Q9NS84 486 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 RNF14Q9UBS8 474 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 USTQ9Y2C2 406 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 CDY1Q9Y6F8 540 aa18.2■□□□□ 0.5
PPFIA3-207ENST00000602716 PTPRDP23468 1912 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 GOLGA6BA6NDN3 693 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 GRXCR1A8MXD5 290 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 SPOPO43791 374 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 SOD2P04179 222 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 CPB1P15086 417 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 MYOGP15173 224 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 SLC6A3Q01959 620 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 PSMD5Q16401 504 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 USP41Q3LFD5 358 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 SH3PXD2AQ5TCZ1 1133 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 RASIP1Q5U651 963 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 AADACL2Q6P093 401 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 RNF19BQ6ZMZ0 732 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 HFE2Q6ZVN8 426 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 SND1Q7KZF4 910 aaKnown RBP eCLIP18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 ARFGAP1Q8N6T3 406 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 TMEM169Q96HH4 297 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 ULBP1Q9BZM6 244 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 DMAP1Q9NPF5 467 aaPredicted RBP18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 RBM12Q9NTZ6 932 aaKnown RBP18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 SPG21Q9NZD8 308 aa18.19■□□□□ 0.5
PPFIA3-207ENST00000602716 RANBP2P49792 3224 aaKnown RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 MTMR11A4FU01 709 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 OR6C75A6NL08 312 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 KCNK3O14649 394 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 TFE3P19532 575 aaPredicted RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 DNAJB2P25686 324 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 MAGEA10P43363 369 aaPredicted RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 TKTL1P51854 596 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 SLC7A5Q01650 507 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 ZNF211Q13398 564 aaPredicted RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 GLE1Q53GS7 698 aaKnown RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 LRRC31Q6UY01 552 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 ANKS3Q6ZW76 656 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 BHLHA9Q7RTU4 235 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 FIBCD1Q8N539 461 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 KCTD13Q8WZ19 329 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 SLC9A7Q96T83 725 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 HERC2P3Q9BVR0 1158 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 MTRRQ9UBK8 725 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 WDR27A2RRH5 827 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 C2CD4BA6NLJ0 364 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 TLL1O43897 1013 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 MRPS25P82663 173 aaKnown RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 MAPRE1Q15691 268 aaKnown RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 C15orf59Q2T9L4 293 aaPredicted RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 RAB41Q5JT25 222 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 TXNRD3NBQ6F5E7 133 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 EMBQ6PCB8 327 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 DCP1BQ8IZD4 617 aaKnown RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 SP7Q8TDD2 431 aaPredicted RBP18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 PIK3R5Q8WYR1 880 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 INSL6Q9Y581 213 aa18.18■□□□□ 0.5
PPFIA3-207ENST00000602716 CSPG5O95196 566 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 PSMA2P25787 234 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 GJC1P36383 396 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 SLC8A3P57103 927 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 ROR1Q01973 937 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms