RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	GJA4	P35212	333 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	CCR3	P51677	355 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	MAP3K7CL	P57077	242 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	UBE2H	P62256	183 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	AMPD2	Q01433	879 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	TMEM196	Q5HYL7	178 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	TTI2	Q6NXR4	508 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	TSSK4	Q6SA08	328 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223		Q6ZS52	159 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	CLEC20A	Q6ZU45	233 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	FILIP1	Q7Z7B0	1213 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	SYNPO	Q8N3V7	929 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	SPEM1	Q8N4L4	309 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	CPA6	Q8N4T0	437 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	TTC39C	Q8N584	583 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	ZBTB44	Q8NCP5	570 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	TTC16	Q8NEE8	873 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	TATDN2	Q93075	761 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	ATP2A3	Q93084	1043 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	SLC35C1	Q96A29	364 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	DUSP9	Q99956	384 aa	Known RBP	13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	DNAI2	Q9GZS0	605 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	METTL14	Q9HCE5	456 aa	Known RBP	13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	ZSCAN32	Q9NX65	697 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	PCDHGA2	Q9Y5H1	932 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	CPQ	Q9Y646	472 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	EP300	Q09472	2414 aa	Predicted RBP	13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	RALGAPA1	Q6GYQ0	2036 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	HHLA1	C9JL84	531 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	LILRB5	O75023	590 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	LMNA	P02545	664 aa	Known RBP	13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	MBL2	P11226	248 aa	Predicted RBP	13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	CXCL12	P48061	93 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	TUB	P50607	506 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	SATB1	Q01826	763 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	PPP2R5D	Q14738	602 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	KLHL10	Q6JEL2	608 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	FSTL4	Q6MZW2	842 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	NELFB	Q8WX92	580 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	ARID3A	Q99856	593 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	LINC00597	Q9H2U6	94 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	FBXO44	Q9H4M3	255 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	PNPLA8	Q9NP80	782 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	CISH	Q9NSE2	258 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	GMIP	Q9P107	970 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	GVINP1	Q7Z2Y8	2422 aa		13.12	□□□□□ -0.31
STRN4-223	ENST00000602223	BICDL2	A1A5D9	508 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	BIN1	O00499	593 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	COCH	O43405	550 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	PAPSS2	O95340	614 aa	Predicted RBP	13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	NFATC1	O95644	943 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	RAD23B	P54727	409 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	ZNF394	Q53GI3	561 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	HECTD3	Q5T447	861 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	GPRIN1	Q7Z2K8	1008 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	TRIML1	Q8N9V2	468 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	SLC4A11	Q8NBS3	891 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	TMEM176A	Q96HP8	235 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	ZFR	Q96KR1	1074 aa	Known RBP	13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	SMPD4	Q9NXE4	827 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223	CTNND2	Q9UQB3	1225 aa		13.11	□□□□□ -0.31
STRN4-223	ENST00000602223		K7ESF4	209 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	SLC9A3R1	O14745	358 aa	Predicted RBP	13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	PMM2	O15305	246 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	EGF	P01133	1207 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	DRD1	P21728	446 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	FMO5	P49326	533 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	PGF	P49763	221 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	GALK1	P51570	392 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	NRL	P54845	237 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	NR1H3	Q13133	447 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	PAK1	Q13153	545 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	CUL2	Q13617	745 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	CCDC40	Q4G0X9	1142 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	ARHGAP17	Q68EM7	881 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	NAIF1	Q69YI7	327 aa	Predicted RBP	13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	SUMF1	Q8NBK3	374 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	ATRIP	Q8WXE1	791 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	CD101	Q93033	1021 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	EXOC4	Q96A65	974 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	HEXIM2	Q96MH2	286 aa	Known RBP	13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	P2RY13	Q9BPV8	354 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	DUSP16	Q9BY84	665 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	CCSER2	Q9H7U1	834 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	TLR8	Q9NR97	1041 aa	Known RBP	13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	C2orf42	Q9NWW7	574 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	KIAA1468	Q9P260	1216 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	CFAP97	Q9P2B7	532 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	SCML2	Q9UQR0	700 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	GPR179	Q6PRD1	2367 aa		13.1	□□□□□ -0.31
STRN4-223	ENST00000602223	E2F8	A0AVK6	867 aa		13.09	□□□□□ -0.31
STRN4-223	ENST00000602223	TLR5	O60602	858 aa		13.09	□□□□□ -0.31
STRN4-223	ENST00000602223	ACO1	P21399	889 aa	Known RBP	13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms