RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 COMMD8Q9NX08 183 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 CHORDC1Q9UHD1 332 aaPredicted RBP18.03■□□□□ 0.48
SCAF1-204ENST00000601038 HPSEQ9Y251 543 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 MYO16Q9Y6X6 1858 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 NCOR2Q9Y618 2525 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 E2F8A0AVK6 867 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 COCHO43405 550 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 EIF2DP41214 584 aaKnown RBP18.02■□□□□ 0.48
SCAF1-204ENST00000601038 TUBP50607 506 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 LIMK1P53667 647 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 SLC5A3P53794 718 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 SF3A2Q15428 464 aaKnown RBP18.02■□□□□ 0.48
SCAF1-204ENST00000601038 CCDC6Q16204 474 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 AASDHQ4L235 1098 aaPredicted RBP18.02■□□□□ 0.48
SCAF1-204ENST00000601038 HECTD3Q5T447 861 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 RHBDF2Q6PJF5 856 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 SCARA5Q6ZMJ2 495 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 SV2AQ7L0J3 742 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 ACOT1Q86TX2 421 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 CRYBG2Q8N1P7 616 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 TSTD1Q8NFU3 115 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 PNKPQ96T60 521 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 DUSP15Q9H1R2 295 aaPredicted RBP18.02■□□□□ 0.48
SCAF1-204ENST00000601038 TRAF3IP3Q9Y228 551 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 FRMD4BQ9Y2L6 1034 aa18.02■□□□□ 0.48
SCAF1-204ENST00000601038 SPTBN2O15020 2390 aa18.02■□□□□ 0.47
SCAF1-204ENST00000601038 KIAA1549LQ6ZVL6 1849 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 A0A0A0MRY4 1105 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 FAM92AA1XBS5 289 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 SCAMP3O14828 347 aaKnown RBP18.01■□□□□ 0.47
SCAF1-204ENST00000601038 AP1G2O75843 785 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 RHOBTB1O94844 696 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 KIF20AO95235 890 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 ADH1CP00326 375 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 ZDHHC11BP0C7U3 371 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 SLC6A11P48066 632 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 DGKEP52429 567 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 SEC13P55735 322 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 MRPS21P82921 87 aaKnown RBP18.01■□□□□ 0.47
SCAF1-204ENST00000601038 ELF2Q15723 593 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 PPM1JQ5JR12 505 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 CEP135Q66GS9 1140 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 UNC93AQ86WB7 457 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 DDX1Q92499 740 aaKnown RBP18.01■□□□□ 0.47
SCAF1-204ENST00000601038 OTUB2Q96DC9 234 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 ZFRQ96KR1 1074 aaKnown RBP18.01■□□□□ 0.47
SCAF1-204ENST00000601038 SPATA32Q96LK8 384 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 KRT82Q9NSB4 513 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 MMP17Q9ULZ9 603 aa18.01■□□□□ 0.47
SCAF1-204ENST00000601038 DCLK1O15075 740 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 MAPK13O15264 365 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 CALUO43852 315 aaPredicted RBP18■□□□□ 0.47
SCAF1-204ENST00000601038 KAT7O95251 611 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 ASS1P00966 412 aaKnown RBP18■□□□□ 0.47
SCAF1-204ENST00000601038 ADRB1P08588 477 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 MPLP40238 635 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 SYKP43405 635 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 NDST1P52848 882 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 KRT85P78386 507 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 CRY1Q16526 586 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 USP39Q53GS9 565 aaKnown RBP18■□□□□ 0.47
SCAF1-204ENST00000601038 C1orf220Q5T0J3 134 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 RASSF3Q86WH2 238 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 CCDC33Q8N5R6 958 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 ZMIZ2Q8NF64 920 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 SMOQ99835 787 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 DUSP9Q99956 384 aaKnown RBP18■□□□□ 0.47
SCAF1-204ENST00000601038 FBXO44Q9H4M3 255 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 CCSER2Q9H7U1 834 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 CSNK1G1Q9HCP0 422 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 VPS45Q9NRW7 570 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 MYOFQ9NZM1 2061 aa18■□□□□ 0.47
SCAF1-204ENST00000601038 FAM237AA0A1B0GTK4 181 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 ANTXRLA6NF34 631 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 BEST1O76090 585 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 RHOBTB3O94955 611 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 HLA-DRAP01903 254 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 APODP05090 189 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 ADH5P11766 374 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 CCDC130P13994 396 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 ASPAP45381 313 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 VAMP7P51809 220 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 GAD2Q05329 585 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 NFIL3Q16649 462 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 HSF5Q4G112 596 aaPredicted RBP17.99■□□□□ 0.47
SCAF1-204ENST00000601038 LY6G5CQ5SRR4 150 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 IL31Q6EBC2 164 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 C11orf74Q86VG3 221 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 C12orf40Q86WS4 652 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 SLC2A14Q8TDB8 520 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 CCDC47Q96A33 483 aaKnown RBP17.99■□□□□ 0.47
SCAF1-204ENST00000601038 CNOT6LQ96LI5 555 aaKnown RBP17.99■□□□□ 0.47
SCAF1-204ENST00000601038 RXFP3Q9NSD7 469 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 GMIPQ9P107 970 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 HMGXB4Q9UGU5 601 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 ZDHHC9Q9Y397 364 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 SH3BP1Q9Y3L3 701 aa17.99■□□□□ 0.47
SCAF1-204ENST00000601038 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.98■□□□□ 0.47
SCAF1-204ENST00000601038 TM4SF5O14894 197 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 CHRM1P11229 460 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms