RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	SDK1	Q7Z5N4	2213 aa		13.54	□□□□□ -0.24
FKRP-223	ENST00000600872	ANTXRL	A6NF34	631 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	COCH	O43405	550 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	GREM1	O60565	184 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	KRT13	P13646	458 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	TGM1	P22735	817 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	HOXA6	P31267	233 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	OPRD1	P41143	372 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	MESP2	Q0VG99	397 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	ADGRG2	Q8IZP9	1017 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	TATDN2	Q93075	761 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	FBXO32	Q969P5	355 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	FAXDC2	Q96IV6	333 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	SLITRK1	Q96PX8	696 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	DUSP9	Q99956	384 aa	Known RBP	13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	MMRN2	Q9H8L6	949 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	COMMD8	Q9NX08	183 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	OSER1	Q9NX31	292 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	GMIP	Q9P107	970 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	MAN1B1	Q9UKM7	699 aa		13.53	□□□□□ -0.24
FKRP-223	ENST00000600872	CHURC1-FNTB	B4DL54	471 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	PPP1R3G	B7ZBB8	358 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	CETN3	O15182	167 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	SLC16A3	O15427	465 aa	Known RBP	13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	HR	O43593	1189 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	MXI1	P50539	228 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	TUB	P50607	506 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	PDE6C	P51160	858 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	MAP3K7CL	P57077	242 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	IFRD2	Q12894	506 aa	Predicted RBP	13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	CPA6	Q8N4T0	437 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	SLC4A11	Q8NBS3	891 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	FBXL13	Q8NEE6	735 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	ATRIP	Q8WXE1	791 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	ATP2A3	Q93084	1043 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	SMARCE1	Q969G3	411 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	SLC35C1	Q96A29	364 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	CYFIP2	Q96F07	1278 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	ARID3A	Q99856	593 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	MED10	Q9BTT4	135 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	NT5C1A	Q9BXI3	368 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	CCSER2	Q9H7U1	834 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	RAB20	Q9NX57	234 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	SMPD4	Q9NXE4	827 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	ATP8B3	O60423	1300 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	CACNA1A	O00555	2505 aa		13.52	□□□□□ -0.25
FKRP-223	ENST00000600872	GOLGA6L4	A6NEF3	574 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	SCAMP3	O14828	347 aa	Known RBP	13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	SMC2	O95347	1197 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	CYP17A1	P05093	508 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	EPB41	P11171	864 aa	Known RBP	13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	IFNAR2	P48551	515 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	FNTB	P49356	437 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	RAD23B	P54727	409 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	NRL	P54845	237 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	FKBP3	Q00688	224 aa	Known RBP	13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	LRRC63	Q05C16	580 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	SRSF5	Q13243	272 aa	Known RBP	13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	ISM2	Q6H9L7	571 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	TTI2	Q6NXR4	508 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	RHBDF2	Q6PJF5	856 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	FILIP1	Q7Z7B0	1213 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	SFTPA1	Q8IWL2	248 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	UBR7	Q8N806	425 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	PDZD8	Q8NEN9	1154 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	RUBCN	Q92622	972 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	CCDC34	Q96HJ3	373 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	P2RY13	Q9BPV8	354 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	IMPG2	Q9BZV3	1241 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	CFAP97	Q9P2B7	532 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	SMG5	Q9UPR3	1016 aa	Known RBP	13.51	□□□□□ -0.25
FKRP-223	ENST00000600872	RALGAPA1	Q6GYQ0	2036 aa		13.51	□□□□□ -0.25
FKRP-223	ENST00000600872		K7EQS6	105 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	RNF40	O75150	1001 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	ABL1	P00519	1130 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	FAM200B	P0CF97	657 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	MBL2	P11226	248 aa	Predicted RBP	13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	CD58	P19256	250 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	DRD1	P21728	446 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	ADORA2B	P29275	332 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	KIF11	P52732	1056 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	MORC3	Q14149	939 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	DHCR24	Q15392	516 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	HECTD3	Q5T447	861 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	FOXR2	Q6PJQ5	311 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	C12orf40	Q86WS4	652 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	PHTF2	Q8N3S3	785 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	TTC16	Q8NEE8	873 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	CD101	Q93033	1021 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	NMUR1	Q9HB89	426 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	PNPLA8	Q9NP80	782 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	CYLD	Q9NQC7	956 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	CISH	Q9NSE2	258 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	SCML2	Q9UQR0	700 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	USP3	Q9Y6I4	520 aa		13.5	□□□□□ -0.25
FKRP-223	ENST00000600872	LAMA1	P25391	3075 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms