RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CARNS1A5YM72 827 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 TRUB2O95900 331 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 KRT1P04264 644 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 H2AFXP16104 143 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 PBX3P40426 434 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 PPIGQ13427 754 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 C15orf59Q2T9L4 293 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 TXNRD3NBQ6F5E7 133 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 WDR93Q6P2C0 686 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 ADAT2Q7Z6V5 191 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 CMTR2Q8IYT2 770 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 TTPALQ9BTX7 342 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 ULBP1Q9BZM6 244 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 SLITRK6Q9H5Y7 841 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 ARGLU1Q9NWB6 273 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 NR2E1Q9Y466 385 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 DAB1O75553 588 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 EFEMP2O95967 443 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 OR4Q2P0C623 313 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 IL1R2P27930 398 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 MATKP42679 507 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 DAOAP59103 153 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 ANKS3Q6ZW76 656 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 TMEM173Q86WV6 379 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 SCML4Q8N228 414 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 CCDC26Q8TAB7 109 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 BCL7CQ8WUZ0 217 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 IRGQQ8WZA9 623 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 CENPIQ92674 756 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 RNF25Q96BH1 459 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 SLITRK1Q96PX8 696 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 PNKPQ96T60 521 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 C11orf84Q9BUA3 381 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 OSBPL8Q9BZF1 889 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 ZWILCHQ9H900 591 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 PCSK1NQ9UHG2 260 aa18.48■□□□□ 0.55
SHKBP1-224ENST00000600718 TBC1D4O60343 1298 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 ZBED1O96006 694 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 PTPN7P35236 360 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 ATP11AP98196 1134 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 SMARCB1Q12824 385 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 SPOUT1Q5T280 376 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 SH3PXD2AQ5TCZ1 1133 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 GPRIN1Q7Z2K8 1008 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 DEFB106AQ8N104 65 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 CMASQ8NFW8 434 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 FAM172AQ8WUF8 416 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 NDRG1Q92597 394 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 FAM149B1Q96BN6 582 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 IGSF21Q96ID5 467 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 DDX47Q9H0S4 455 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 RC3H2Q9HBD1 1191 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 PCDHB5Q9Y5E4 795 aa18.47■□□□□ 0.55
SHKBP1-224ENST00000600718 PRPSAP2O60256 369 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 RARAP10276 462 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 RALAP11233 206 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 CYP2F1P24903 491 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 NOS2P35228 1153 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 GRIK1P39086 918 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 RABGGTBP53611 331 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 BRD3Q15059 726 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 CYP1B1Q16678 543 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 CDO1Q16878 200 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 BOLA3Q53S33 107 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 PM20D1Q6GTS8 502 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 FAM117BQ6P1L5 589 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 KCNT2Q6UVM3 1135 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 VSTM1Q6UX27 236 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 TAS1R1Q7RTX1 841 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 MAATS1Q7Z4T9 603 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 PRELID2Q8N945 189 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 B3GALT6Q96L58 329 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 ZNF558Q96NG5 402 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 SLC2A13Q96QE2 648 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 POPDC2Q9HBU9 364 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 NGRNQ9NPE2 291 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 TCRBV7S2A1N4TA0A589 114 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 PI4K2BG5E9Z4 385 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 PHF2O75151 1096 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 FGBP02675 491 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 CHRNA3P32297 505 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 MAGEA11P43364 429 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 BTG3Q14201 252 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 SIX1Q15475 284 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 USP41Q3LFD5 358 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 SLC25A52Q3SY17 297 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 RTP2Q5QGT7 225 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 MFSD7Q6UXD7 560 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 SPOCD1Q6ZMY3 1216 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 STRADAQ7RTN6 431 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 OTOP2Q7RTS6 562 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 ZDHHC14Q8IZN3 488 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 HDAC7Q8WUI4 952 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 RAPGEF5Q92565 580 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 KLHL11Q9NVR0 708 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 ABI2Q9NYB9 513 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 EFR3BQ9Y2G0 817 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 USP3Q9Y6I4 520 aa18.46■□□□□ 0.55
SHKBP1-224ENST00000600718 LRRD1A4D1F6 860 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms