RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 NDST4Q9H3R1 872 aa16.64■□□□□ 0.25
RPS28-203ENST00000600659 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
RPS28-203ENST00000600659 ANO10Q9NW15 660 aa16.64■□□□□ 0.25
RPS28-203ENST00000600659 GTSE1Q9NYZ3 720 aa16.64■□□□□ 0.25
RPS28-203ENST00000600659 CHORDC1Q9UHD1 332 aaPredicted RBP16.64■□□□□ 0.25
RPS28-203ENST00000600659 SCML2Q9UQR0 700 aa16.64■□□□□ 0.25
RPS28-203ENST00000600659 MTF2Q9Y483 593 aaPredicted RBP16.64■□□□□ 0.25
RPS28-203ENST00000600659 PCDHB4Q9Y5E5 795 aa16.64■□□□□ 0.25
RPS28-203ENST00000600659 KIAA1549LQ6ZVL6 1849 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 KANSL1LA0AUZ9 987 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 OTOL1A6NHN0 477 aaPredicted RBP16.63■□□□□ 0.25
RPS28-203ENST00000600659 BECN2A8MW95 431 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 DPYSL4O14531 572 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 CYP26A1O43174 497 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 GABBR2O75899 941 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 CKMP06732 381 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 VDRP11473 427 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 HDCP19113 662 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 SOX9P48436 509 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 TYRO3Q06418 890 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 PDE4CQ08493 712 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 KCNMA1Q12791 1236 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 FZD5Q13467 585 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 MTF1Q14872 753 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 EXOC3L4Q17RC7 722 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 VWA3BQ502W6 1294 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 ARHGAP29Q52LW3 1261 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 SGO2Q562F6 1265 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 GBP6Q6ZN66 633 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 BHLHA9Q7RTU4 235 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 PIGZQ86VD9 579 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 CREBRFQ8IUR6 639 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 CCDC105Q8IYK2 499 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 PDZD8Q8NEN9 1154 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 PJA1Q8NG27 643 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 FUCA2Q9BTY2 467 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 CCSER2Q9H7U1 834 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 NMUR1Q9HB89 426 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 LTB4R2Q9NPC1 389 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 APEX2Q9UBZ4 518 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 USP34Q70CQ2 3546 aa16.63■□□□□ 0.25
RPS28-203ENST00000600659 COCHO43405 550 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 TRIM21P19474 475 aaKnown RBP16.62■□□□□ 0.25
RPS28-203ENST00000600659 BRD2P25440 801 aaKnown RBP16.62■□□□□ 0.25
RPS28-203ENST00000600659 TARSP26639 723 aaKnown RBP16.62■□□□□ 0.25
RPS28-203ENST00000600659 EEF1GP26641 437 aaKnown RBP16.62■□□□□ 0.25
RPS28-203ENST00000600659 TUBP50607 506 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 TRIM68Q6AZZ1 485 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 CAVIN1Q6NZI2 390 aaKnown RBP16.62■□□□□ 0.25
RPS28-203ENST00000600659 TXNDC11Q6PKC3 985 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 SASS6Q6UVJ0 657 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 LCLAT1Q6UWP7 414 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 CCDC186Q7Z3E2 898 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 SCD5Q86SK9 330 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 SH3RF2Q8TEC5 729 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 UBXN6Q9BZV1 441 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 FBXO44Q9H4M3 255 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 UBE2TQ9NPD8 197 aaPredicted RBP16.62■□□□□ 0.25
RPS28-203ENST00000600659 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.62■□□□□ 0.25
RPS28-203ENST00000600659 CPQQ9Y646 472 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 PIAS3Q9Y6X2 628 aa16.62■□□□□ 0.25
RPS28-203ENST00000600659 LEFTY2O00292 366 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 XPO1O14980 1071 aaKnown RBP16.61■□□□□ 0.25
RPS28-203ENST00000600659 PRKCSHP14314 528 aaPredicted RBP16.61■□□□□ 0.25
RPS28-203ENST00000600659 ARSAP15289 507 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 CD19P15391 556 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 ZNF18P17022 549 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 BCAT1P54687 386 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 MLLT6P55198 1093 aaPredicted RBP16.61■□□□□ 0.25
RPS28-203ENST00000600659 PLCB2Q00722 1185 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 TCF15Q12870 199 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 KRT31Q15323 416 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 APTXQ7Z2E3 356 aaKnown RBP16.61■□□□□ 0.25
RPS28-203ENST00000600659 YAF2Q8IY57 180 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 SHC3Q92529 594 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 WBP2Q969T9 261 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 ACP6Q9NPH0 428 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 CYLDQ9NQC7 956 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 GKN1Q9NS71 199 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 FANCLQ9NW38 375 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 TAB2Q9NYJ8 693 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 KIAA1257Q9ULG3 409 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 HCN4Q9Y3Q4 1203 aa16.61■□□□□ 0.25
RPS28-203ENST00000600659 FANCMQ8IYD8 2048 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 TLR5O60602 858 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 ABL1P00519 1130 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 DCNP07585 359 aaKnown RBP16.6■□□□□ 0.25
RPS28-203ENST00000600659 PLA2G4AP47712 749 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 PDE6CP51160 858 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 MYL5Q02045 173 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 BST2Q10589 180 aaKnown RBP16.6■□□□□ 0.25
RPS28-203ENST00000600659 CNGA2Q16280 664 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 KLHL40Q2TBA0 621 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 HECTD3Q5T447 861 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 ENOSF1Q7L5Y1 443 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 TTC8Q8TAM2 541 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 UBA3Q8TBC4 463 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 OSCP1Q8WVF1 389 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 SHDQ96IW2 340 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 OSBPL6Q9BZF3 934 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms