RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 RFX1P22670 979 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 HOXD11P31277 338 aaPredicted RBP9.29□□□□□ -0.92
SSBP4-208ENST00000600628 AVPR1AP37288 418 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 PDE6CP51160 858 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 NCAPHQ15003 741 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 GAB4Q2WGN9 574 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 PM20D1Q6GTS8 502 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 KLHDC10Q6PID8 442 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 LCLAT1Q6UWP7 414 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 APTXQ7Z2E3 356 aaKnown RBP9.29□□□□□ -0.92
SSBP4-208ENST00000600628 GPIHBP1Q8IV16 184 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 MAML2Q8IZL2 1156 aaPredicted RBP9.29□□□□□ -0.92
SSBP4-208ENST00000600628 ARL14EPQ8N8R7 260 aaPredicted RBP9.29□□□□□ -0.92
SSBP4-208ENST00000600628 DTWD2Q8NBA8 298 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 PDZD8Q8NEN9 1154 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 SLC35F5Q8WV83 523 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 TFAP2BQ92481 460 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 NELL1Q92832 810 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 NT5C1BQ96P26 610 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 SLITRK1Q96PX8 696 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 GCNAQ96QF7 691 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 NELL2Q99435 816 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 FOXQ1Q9C009 403 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 INTS2Q9H0H0 1204 aaKnown RBP9.29□□□□□ -0.92
SSBP4-208ENST00000600628 SMG9Q9H0W8 520 aaKnown RBP9.29□□□□□ -0.92
SSBP4-208ENST00000600628 FBXO44Q9H4M3 255 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 BRD9Q9H8M2 597 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 LTB4R2Q9NPC1 389 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 OSER1Q9NX31 292 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 MTF2Q9Y483 593 aaPredicted RBP9.29□□□□□ -0.92
SSBP4-208ENST00000600628 OTOGLQ3ZCN5 2332 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 TRAV19A0A0A6YYK7 116 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 BECN2A8MW95 431 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 ZNF263O14978 683 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 COCHO43405 550 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 DCNP07585 359 aaKnown RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 VDRP11473 427 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 ZNF18P17022 549 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 HDCP19113 662 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 TARSP26639 723 aaKnown RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 PON1P27169 355 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 CTHP32929 405 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 MAGEA9P43362 315 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 MAP3K7CLP57077 242 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 YWHAEP62258 255 aaKnown RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 TNK2Q07912 1038 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 KCNMA1Q12791 1236 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 CCINQ13939 588 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 CNGA2Q16280 664 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 MAN2A1Q16706 1144 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 EML3Q32P44 896 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 ZNF394Q53GI3 561 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 C1orf228Q6PIY5 440 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 TXNDC11Q6PKC3 985 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 ENOSF1Q7L5Y1 443 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 SCD5Q86SK9 330 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 RALGPS2Q86X27 583 aaPredicted RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 OSCP1Q8WVF1 389 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 KCTD13Q8WZ19 329 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 SHC3Q92529 594 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 ATOH1Q92858 354 aaPredicted RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 ZFYVE19Q96K21 471 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 HEXIM2Q96MH2 286 aaKnown RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 FUCA2Q9BTY2 467 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 C8orf33Q9H7E9 229 aaPredicted RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 GKN1Q9NS71 199 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 SAMSN1Q9NSI8 373 aaKnown RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 GTSE1Q9NYZ3 720 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 CLIC5Q9NZA1 410 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 APEX2Q9UBZ4 518 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 DACH1Q9UI36 760 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 GVINP1Q7Z2Y8 2422 aa9.28□□□□□ -0.92
SSBP4-208ENST00000600628 MYO18AQ92614 2054 aaKnown RBP9.28□□□□□ -0.92
SSBP4-208ENST00000600628 FAM186AA6NE01 2351 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 GPR179Q6PRD1 2367 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 FAM170BA6NMN3 283 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 GOLGA6L22H0YM25 854 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 TULP2O00295 520 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 MAN2B1O00754 1011 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 DPYSL4O14531 572 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 XPO1O14980 1071 aaKnown RBP9.27□□□□□ -0.93
SSBP4-208ENST00000600628 CHRNB1P11230 501 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 TDGF1P13385 188 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 SLC9A1P19634 815 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 CD72P21854 359 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 EEF1GP26641 437 aaKnown RBP9.27□□□□□ -0.93
SSBP4-208ENST00000600628 ADORA2BP29275 332 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 PLA2G4AP47712 749 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 BCAT1P54687 386 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 APBA1Q02410 837 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 CETN1Q12798 172 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 RUNX3Q13761 415 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 GAS6Q14393 721 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 MTF1Q14872 753 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 STILQ15468 1287 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 EXOC3L4Q17RC7 722 aa9.27□□□□□ -0.93
SSBP4-208ENST00000600628 SGO2Q562F6 1265 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms