RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 CALUO43852 315 aaPredicted RBP19.87■□□□□ 0.77
PNKP-213ENST00000599543 FOXD2O60548 495 aaPredicted RBP19.87■□□□□ 0.77
PNKP-213ENST00000599543 MBL2P11226 248 aaPredicted RBP19.87■□□□□ 0.77
PNKP-213ENST00000599543 SGSM1Q2NKQ1 1148 aa19.87■□□□□ 0.77
PNKP-213ENST00000599543 ZACNQ401N2 412 aa19.87■□□□□ 0.77
PNKP-213ENST00000599543 ISM2Q6H9L7 571 aa19.87■□□□□ 0.77
PNKP-213ENST00000599543 SMYD4Q8IYR2 804 aaPredicted RBP19.87■□□□□ 0.77
PNKP-213ENST00000599543 EZH1Q92800 747 aaPredicted RBP19.87■□□□□ 0.77
PNKP-213ENST00000599543 KRT82Q9NSB4 513 aa19.87■□□□□ 0.77
PNKP-213ENST00000599543 POLR3BQ9NW08 1133 aaPredicted RBP19.87■□□□□ 0.77
PNKP-213ENST00000599543 CFAP97Q9P2B7 532 aa19.87■□□□□ 0.77
PNKP-213ENST00000599543 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.86■□□□□ 0.77
PNKP-213ENST00000599543 AXIN1O15169 862 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 APBB3O95704 486 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 CYP17A1P05093 508 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 TRIM21P19474 475 aaKnown RBP19.86■□□□□ 0.77
PNKP-213ENST00000599543 PIK3CAP42336 1068 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 SLC5A3P53794 718 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 DMC1Q14565 340 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 ACOT1Q86TX2 421 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 TMC2Q8TDI7 906 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 TAF4BQ92750 862 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 LOXL4Q96JB6 756 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 SDCBP2Q9H190 292 aa19.86■□□□□ 0.77
PNKP-213ENST00000599543 SCAMP3O14828 347 aaKnown RBP19.85■□□□□ 0.77
PNKP-213ENST00000599543 IKBKBO14920 756 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 AP1G2O75843 785 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 AKAP3O75969 853 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 OPRD1P41143 372 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 SEC13P55735 322 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 SV2AQ7L0J3 742 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 KBTBD6Q86V97 674 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 SCAMP5Q8TAC9 235 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 TRAF3IP3Q9Y228 551 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 PCDHA5Q9Y5H7 936 aa19.85■□□□□ 0.77
PNKP-213ENST00000599543 CNOT1A5YKK6 2376 aaKnown RBP19.85■□□□□ 0.77
PNKP-213ENST00000599543 LAMA1P25391 3075 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 DCDC2BA2VCK2 349 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 COCHO43405 550 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 RHOBTB3O94955 611 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 ADH1CP00326 375 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 ASS1P00966 412 aaKnown RBP19.84■□□□□ 0.77
PNKP-213ENST00000599543 CCDC130P13994 396 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 NR2F2P24468 414 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 TUBP50607 506 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 VAMP7P51809 220 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 NDST1P52848 882 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 ORC1Q13415 861 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 DHCR24Q15392 516 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 CAMK4Q16566 473 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 HECTD3Q5T447 861 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 CLEC17AQ6ZS10 378 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 PAQR9Q6ZVX9 377 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 ADGRG2Q8IZP9 1017 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 FUKQ8N0W3 1084 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 TSTD1Q8NFU3 115 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 TIGD1Q96MW7 591 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 IMPG2Q9BZV3 1241 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 ARRDC1-AS1Q9H2J1 176 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 LMBRD1Q9NUN5 540 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 TBC1D14Q9P2M4 693 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 HMGXB4Q9UGU5 601 aa19.84■□□□□ 0.77
PNKP-213ENST00000599543 CHORDC1Q9UHD1 332 aaPredicted RBP19.84■□□□□ 0.77
PNKP-213ENST00000599543 TPRP12270 2363 aaKnown RBP19.83■□□□□ 0.77
PNKP-213ENST00000599543 TNFRSF10BO14763 440 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 SLC30A4O14863 429 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 MAPK13O15264 365 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 EPN2O95208 641 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 HLA-DRAP01903 254 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 ASPAP45381 313 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 GAB4Q2WGN9 574 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 AASDHQ4L235 1098 aaPredicted RBP19.83■□□□□ 0.77
PNKP-213ENST00000599543 C2orf27AQ580R0 203 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 SPOPLQ6IQ16 392 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 INTS8Q75QN2 995 aaKnown RBP19.83■□□□□ 0.77
PNKP-213ENST00000599543 UNC93AQ86WB7 457 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 C12orf50Q8NA57 414 aaPredicted RBP19.83■□□□□ 0.77
PNKP-213ENST00000599543 SLC2A14Q8TDB8 520 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 USP33Q8TEY7 942 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 SMARCE1Q969G3 411 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 CCDC34Q96HJ3 373 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 GBP4Q96PP9 640 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 NACA2Q9H009 215 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 FAM49BQ9NUQ9 324 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 COMMD8Q9NX08 183 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 GMIPQ9P107 970 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 EBF1Q9UH73 591 aa19.83■□□□□ 0.77
PNKP-213ENST00000599543 E2F8A0AVK6 867 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 K7EQS6 105 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 BIN1O00499 593 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 ADH5P11766 374 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 KRT13P13646 458 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 EIF2DP41214 584 aaKnown RBP19.82■□□□□ 0.76
PNKP-213ENST00000599543 SNX30Q5VWJ9 437 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 CRYBG2Q8N1P7 616 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 ZC3H10Q96K80 434 aaKnown RBP19.82■□□□□ 0.76
PNKP-213ENST00000599543 FBXO44Q9H4M3 255 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 CCSER2Q9H7U1 834 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.82■□□□□ 0.76
PNKP-213ENST00000599543 IL37Q9NZH6 218 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms