RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 M0QYV0 167 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 PIK3R2O00459 728 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 THAP12O43422 761 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 CAVIN2O95810 425 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 TBX18O95935 607 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 ABL1P00519 1130 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 OAS1P00973 400 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 USP17L7P0C7H9 530 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 PLA2G4AP47712 749 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 SNX30Q5VWJ9 437 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 MTSS1LQ765P7 747 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 RNF214Q8ND24 703 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 DDX1Q92499 740 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 WBP2Q969T9 261 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 ASIC4Q96FT7 647 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 ULBP1Q9BZM6 244 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 DNAI2Q9GZS0 605 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 TJP2Q9UDY2 1190 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 DUSP12Q9UNI6 340 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 FAM86C2PA6NEL3 165 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 COCHO43405 550 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 OLFM2O95897 454 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 SETSIPP0DME0 302 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 HDCP19113 662 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 DDX6P26196 483 aaKnown RBP eCLIP14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 PBX1P40424 430 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 TKTL1P51854 596 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 PM20D1Q6GTS8 502 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 CCDC186Q7Z3E2 898 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 MFSD6LQ8IWD5 586 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 CLEC4CQ8WTT0 213 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 KCTD13Q8WZ19 329 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 OVCA2Q8WZ82 227 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 ZFYVE19Q96K21 471 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 PCMTD1Q96MG8 357 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 SLITRK1Q96PX8 696 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 FBXO44Q9H4M3 255 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 TDP1Q9NUW8 608 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 EHD2Q9NZN4 543 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 NUDT5Q9UKK9 219 aa14.97□□□□□ -0.01
SHKBP1-217ENST00000598558 FAM170AA1A519 330 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 SHISA7A6NL88 538 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 SOBPA7XYQ1 873 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 AP5Z1O43299 807 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 GFPT2O94808 682 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 SERPINC1P01008 464 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 PDGFBP01127 241 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 SRFP11831 508 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 ALADP13716 330 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 LCP1P13796 627 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 CYP11B1P15538 503 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 CHRNB2P17787 502 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 PPP3CCP48454 512 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 RPL34P49207 117 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 PTK2Q05397 1052 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 ADIGQ0VDE8 80 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 STILQ15468 1287 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 TRIM67Q6ZTA4 783 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 HFE2Q6ZVN8 426 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 NOP9Q86U38 636 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 GAS2L3Q86XJ1 694 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 PASD1Q8IV76 773 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 NEK11Q8NG66 645 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 ZFRQ96KR1 1074 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 PCDHGC3Q9UN70 934 aa14.96□□□□□ -0.01
SHKBP1-217ENST00000598558 TRAV19A0A0A6YYK7 116 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 KRBA1A5PL33 1030 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 YJEFN3A6XGL0 299 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 E7ENQ6 273 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 GOLGA6L19H0YKK7 550 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 ARNTLO00327 626 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 MDM4O15151 490 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 ZBED1O96006 694 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 PSMC3P17980 439 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 RFX1P22670 979 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 GDI1P31150 447 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 SOX5P35711 763 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 AVPR1AP37288 418 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 UBASH3AP57075 661 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 SLC7A9P82251 487 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 FCHO2Q0JRZ9 810 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 HECTD3Q5T447 861 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 TAF3Q5VWG9 929 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 SMYD5Q6GMV2 418 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 UBALD2Q8IYN6 164 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 CELF5Q8N6W0 485 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 PDZD8Q8NEN9 1154 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 SH3RF2Q8TEC5 729 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 SLC20A1Q8WUM9 679 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 BAP1Q92560 729 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 TRMT61BQ9BVS5 477 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 SLC4A5Q9BY07 1137 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 LRRC4Q9HBW1 653 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 SLC2A4RGQ9NR83 387 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 GKN1Q9NS71 199 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 SMPD4Q9NXE4 827 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 OBP2AQ9NY56 170 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 IFNKQ9P0W0 207 aa14.95□□□□□ -0.02
SHKBP1-217ENST00000598558 NOCTQ9UK39 431 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms