RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 IL17RCQ8NAC3 791 aa18.07■□□□□ 0.48
PNKP-210ENST00000597965 OLIG1Q8TAK6 271 aa18.07■□□□□ 0.48
PNKP-210ENST00000597965 FBXO32Q969P5 355 aa18.07■□□□□ 0.48
PNKP-210ENST00000597965 C7orf25Q9BPX7 421 aa18.07■□□□□ 0.48
PNKP-210ENST00000597965 NXF1Q9UBU9 619 aaKnown RBP18.07■□□□□ 0.48
PNKP-210ENST00000597965 INVSQ9Y283 1065 aa18.07■□□□□ 0.48
PNKP-210ENST00000597965 SH3BP1Q9Y3L3 701 aa18.07■□□□□ 0.48
PNKP-210ENST00000597965 TGFB1I1O43294 461 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 CUTAO60888 179 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 CLSTN1O94985 981 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 KLF8O95600 359 aaPredicted RBP18.06■□□□□ 0.48
PNKP-210ENST00000597965 P4HA1P13674 534 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 HOXD12P35452 270 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 HOXD13P35453 343 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 E2F4Q16254 413 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 GAB4Q2WGN9 574 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 SH3PXD2AQ5TCZ1 1133 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 SNX30Q5VWJ9 437 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 RHBDF2Q6PJF5 856 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 UNC13DQ70J99 1090 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 RABEPKQ7Z6M1 372 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 C12orf56Q8IXR9 622 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 ALLCQ8N6M5 410 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 TXNDC5Q8NBS9 432 aaKnown RBP18.06■□□□□ 0.48
PNKP-210ENST00000597965 GLIS3Q8NEA6 775 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 PIGKQ92643 395 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 HPS3Q969F9 1004 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 DHX58Q96C10 678 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 SMARCD1Q96GM5 515 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 NACA2Q9H009 215 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 VRTNQ9H8Y1 702 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 DMAP1Q9NPF5 467 aaPredicted RBP18.06■□□□□ 0.48
PNKP-210ENST00000597965 CIZ1Q9ULV3 898 aaPredicted RBP18.06■□□□□ 0.48
PNKP-210ENST00000597965 LAMA1P25391 3075 aa18.06■□□□□ 0.48
PNKP-210ENST00000597965 YEATS4O95619 227 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 TIE1P35590 1138 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 P2RY2P41231 377 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 GOLGA8FQ08AF8 430 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 GOLGA8DPQ0D2H9 430 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 ZNF252P-AS1Q0IIN9 211 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 IFRD2Q12894 506 aaPredicted RBP18.05■□□□□ 0.48
PNKP-210ENST00000597965 TMEM92Q6UXU6 159 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 SYT12Q8IV01 421 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 PGBD3Q8N328 593 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 MED10Q9BTT4 135 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 B3GNT5Q9BYG0 378 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 ZNF518BQ9C0D4 1074 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 FBXO44Q9H4M3 255 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 SLC32A1Q9H598 525 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 DEC1Q9P2X7 70 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 TFIP11Q9UBB9 837 aaKnown RBP18.05■□□□□ 0.48
PNKP-210ENST00000597965 USP24Q9UPU5 2620 aa18.05■□□□□ 0.48
PNKP-210ENST00000597965 PVALEFA0A1B0GWK0 134 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 TBC1D3BA6NDS4 549 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 CLIC2O15247 247 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 EXOC3O60645 756 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 PROS1P07225 676 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 KIR2DL1P43626 348 aaPredicted RBP18.04■□□□□ 0.48
PNKP-210ENST00000597965 SLC6A11P48066 632 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 BIRC3Q13489 604 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 KNOP1Q1ED39 458 aaKnown RBP18.04■□□□□ 0.48
PNKP-210ENST00000597965 BMT2Q1RMZ1 405 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 TRIM61Q5EBN2 209 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 ZNF667Q5HYK9 610 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 LY6G5CQ5SRR4 150 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 NELFCDQ8IXH7 590 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 CEP76Q8TAP6 659 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 SCFD1Q8WVM8 642 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 XYLT2Q9H1B5 865 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 DPEP3Q9H4B8 488 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 FAM13BQ9NYF5 915 aa18.04■□□□□ 0.48
PNKP-210ENST00000597965 SGK1O00141 431 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 HOXC11O43248 304 aaPredicted RBP18.03■□□□□ 0.48
PNKP-210ENST00000597965 AP5Z1O43299 807 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 COCHO43405 550 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 BCKDHBP21953 392 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 MYL6P60660 151 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 IRX4P78413 519 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 ZNF699Q32M78 642 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 SDE2Q6IQ49 451 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 SLC36A4Q6YBV0 504 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 HMGB4Q8WW32 186 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 DNAI2Q9GZS0 605 aa18.03■□□□□ 0.48
PNKP-210ENST00000597965 TCRBV21S2A2A0A5A6 115 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 TMEM8BA6NDV4 472 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 CLDN5O00501 218 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 CDX4O14627 284 aaPredicted RBP18.02■□□□□ 0.48
PNKP-210ENST00000597965 RDXP35241 583 aaKnown RBP18.02■□□□□ 0.48
PNKP-210ENST00000597965 SLC5A3P53794 718 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 ATXN3P54252 364 aaPredicted RBP18.02■□□□□ 0.48
PNKP-210ENST00000597965 CACNA2D1P54289 1103 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 KDSRQ06136 332 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 EHHADHQ08426 723 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 ANO4Q32M45 955 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 LYSMD4Q5XG99 296 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 SLC23A3Q6PIS1 610 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 UNQ6494/PRO21346Q6UXR6 183 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 FAM35AQ86V20 835 aa18.02■□□□□ 0.48
PNKP-210ENST00000597965 ZNF513Q8N8E2 541 aaPredicted RBP18.02■□□□□ 0.48
PNKP-210ENST00000597965 XPO6Q96QU8 1125 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms