RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ULBP1Q9BZM6 244 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 IL37Q9NZH6 218 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 HSFX1Q9UBD0 423 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 AMFRQ9UKV5 643 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 MAFFQ9ULX9 164 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 SSX2IPQ9Y2D8 614 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 YBX2Q9Y2T7 364 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 IRAK3Q9Y616 596 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 DENND4CQ5VZ89 1909 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 ANAPC1Q9H1A4 1944 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 FSCN2O14926 492 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 DDX3YO15523 660 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 PRLRP16471 622 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 GPD1P21695 349 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 CTNNA2P26232 953 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 BMP8BP34820 402 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 FLT3P36888 993 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 GPR15P49685 360 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 ZNF143P52747 638 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 SLC5A3P53794 718 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 ERVK-21P61565 698 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 PIGHQ14442 188 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 EFHC1Q5JVL4 640 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 SCN4BQ8IWT1 228 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 EMC1Q8N766 993 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 ZNF461Q8TAF7 563 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 NDRG1Q92597 394 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 CEP295NLQ96MC4 621 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 L2HGDHQ9H9P8 463 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 SNX12Q9UMY4 172 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 PACSIN2Q9UNF0 486 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 HYOU1Q9Y4L1 999 aa15.47■□□□□ 0.07
SHKBP1-211ENST00000595945 OBSL1O75147 1896 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 TEX28O15482 410 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 SART1O43290 800 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 HSF2BPO75031 334 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 DAB1O75553 588 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 ZBED1O96006 694 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 CA3P07451 260 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 ATF2P15336 505 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 DNAJB1P25685 340 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 DNAJB2P25686 324 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 ERVFC1P60507 584 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 RPL10AP62906 217 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 DUSP4Q13115 394 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 ACAP1Q15027 740 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 RPS6KA1Q15418 735 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 DDR2Q16832 855 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 ARFGAP1Q8N6T3 406 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 SCAMP5Q8TAC9 235 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 RXFP2Q8WXD0 754 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 SLC2A13Q96QE2 648 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 TGS1Q96RS0 853 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 C11orf84Q9BUA3 381 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 DDX23Q9BUQ8 820 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 ALG13Q9NP73 1137 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 COMMD8Q9NX08 183 aa15.46■□□□□ 0.07
SHKBP1-211ENST00000595945 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 FAM92AA1XBS5 289 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 MIF4GDA9UHW6 222 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 TNRC18O15417 2968 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 GRAP2O75791 330 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 URI1O94763 535 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 SEC24AO95486 1093 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 CXCL14O95715 111 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 FYNP06241 537 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 CNPP09543 421 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 USP17L7P0C7H9 530 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 PDGFRAP16234 1089 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 PSMA2P25787 234 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 CTNNA1P35221 906 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 PTPN9P43378 593 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 RGS19P49795 217 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 PEX5P50542 639 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 TUBB2AQ13885 445 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 PTPROQ16827 1216 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 CCDC14Q49A88 953 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 SDHAF4Q5VUM1 108 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 HFE2Q6ZVN8 426 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 NUP93Q8N1F7 819 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 KLHL5Q96PQ7 755 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 CNPY3Q9BT09 278 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 TUBB2BQ9BVA1 445 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 PBX4Q9BYU1 374 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 SLC27A5Q9Y2P5 690 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 MRFAP1Q9Y605 127 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 SAR1BQ9Y6B6 198 aa15.45■□□□□ 0.06
SHKBP1-211ENST00000595945 DOCK6Q96HP0 2047 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 YJEFN3A6XGL0 299 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 E7ENQ6 273 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 SPOPO43791 374 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 SOAT2O75908 522 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 TCP1P17987 556 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 ATF6P18850 670 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 PBX2P40425 430 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 MARCKSL1P49006 195 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 TUFMP49411 452 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 TAS2R40P59535 323 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms